DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and F54H5.2

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_495347.1 Gene:F54H5.2 / 186263 WormBaseID:WBGene00018839 Length:424 Species:Caenorhabditis elegans


Alignment Length:369 Identity:100/369 - (27%)
Similarity:162/369 - (43%) Gaps:60/369 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SAGNVANATTALAGGKSSSNNMYSTRQSVSTTTGVLMVGPNFRVGKKIGCGNFGELRLGKNLYNN 85
            |..:..|.|..|..||                    :||.:::|.:|:|.|..|.:.|.|||.:.
 Worm    10 SVKHTDNGTVELPKGK--------------------IVGCSWQVIRKLGEGGCGSVYLVKNLEDE 54

  Fly    86 EHVAIKMEPMKSKAP-QLHLEYRFYKLLGSHADNAPDGIPRIYHLGTCGGRYNA-------MVLE 142
            ...|:|.|...:... .|.||....|.|        .|.|.:     |...:.|       :::.
 Worm    55 TEAAMKAESNGAAGGCVLKLEVAILKKL--------SGKPHV-----CQFLFAARLTDFTYVIMT 106

  Fly   143 LLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIYRDVKPENFLIG-RTSTKREKII 206
            |||.||..:....||:.::.:.:.||..:|..::.:|....|:||:||.|..:| :|:....:..
 Worm   107 LLGESLNKIVKRIARQITVSSQVRIAANVLFCLKQIHDIGFIHRDLKPANMALGYKTNNDECRFF 171

  Fly   207 HIIDFGLAKEYIDLDTNRHIPY-----REHKSLTGTARYMSINTHMGREQSRRDDLEALGHMFMY 266
            |::|||||::::...:::....     ||.....||.||.||..|...||.|.|||.::.:: :.
 Worm   172 HVLDFGLARQFVVSQSDQPSKLMMRRPRERSLFRGTTRYCSIRMHDRAEQGRVDDLWSILYL-LA 235

  Fly   267 FLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCDGHPEEFATYLRYVRRLDFFETPDYDFLR 331
            .|||.|||..      :...:.:|:.||....||:....|.||....:|:|.|.:|..|||..:.
 Worm   236 ELRGPLPWSS------QNDKRVVGEMKRLHSDEVVLQNSPMEFLEIAKYLRSLTYFHRPDYHKIF 294

  Fly   332 RLFQDLFDRKGYTDEGEFDWTGKTMSTPVGSLQTGHEVIISPNK 375
            .|...:..:..::....|||. ..:|||     ....:..|||:
 Worm   295 MLLISIMSKGKFSWNDPFDWE-MPISTP-----PSKSITKSPNQ 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 86/306 (28%)
S_TKc 62..335 CDD:214567 83/286 (29%)
CK1gamma_C 354..428 CDD:289378 6/22 (27%)
F54H5.2NP_495347.1 PKc_like 31..297 CDD:389743 82/285 (29%)
rplD 317..>422 CDD:184900 6/21 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160808
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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