DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and F41G3.5

DIOPT Version :10

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_495378.2 Gene:F41G3.5 / 185631 WormBaseID:WBGene00018301 Length:331 Species:Caenorhabditis elegans


Alignment Length:326 Identity:93/326 - (28%)
Similarity:159/326 - (48%) Gaps:35/326 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 KSSSNNMYSTRQSVSTTTGVLMVGPNFRVGKKIGCGNFGELRLGKNLYNNEHV-----AIKMEPM 95
            |.:|.|..|  :.|....|..::  :::|.:.|..|.||.      :|..:|:     |:|:|..
 Worm     6 KENSENQVS--EGVELDKGYRLL--DYKVVRFIAKGAFGA------VYQVDHINTLPFALKLESR 60

  Fly    96 KSKAPQLHLEYRFYKLLGSHADNAPDGIPRIYHLGTCG--GRYNAMVLELLGLSLEDLFNICA-R 157
            .|:...|.:|....:.|      .|...|....:..||  .::|.:::.|:|.:|.:|...|. |
 Worm    61 SSETRNLKMEAVVLRSL------LPIRSPYFCRVFFCGKAEKFNFLIMTLVGKNLSELRANCPNR 119

  Fly   158 KFSLKTVLMIAKQLLHRIEYVHSRHLIYRDVKPENFLIGRTSTKREKIIHIIDFGLAKEYI-DLD 221
            |||.:|.|.|..|:::.|:.:||...|:||:||.||.|...:..:   :.::|||:.::|: |..
 Worm   120 KFSRRTGLQIGIQMINAIQQLHSIGFIHRDIKPANFCINLDNPHQ---LVMVDFGMCRKYLNDGG 181

  Fly   222 TN-RHIPYREHKSLTGTARYMSINTHMGREQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKER 285
            |. ||..:..| ...||.||..:.||.||:..|::|||.:.::.:..|.|:|||..::.....|.
 Worm   182 TQLRHPRWSVH-GFRGTVRYAPLATHYGRDSCRKEDLETIFYVLVELLVGTLPWMTMEEHIHVEH 245

  Fly   286 YQKIGDTKRATPIEVLCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFD 350
            .:::.   |.|.:.....|.|::....|.|:..|.|::.|||..:|.|..  |..:.....|.|:
 Worm   246 SKQVA---RTTGLREFLSGCPKQLVHILLYIDNLRFYDAPDYALIRGLLS--FALENCQHNGSFE 305

  Fly   351 W 351
            |
 Worm   306 W 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 87/301 (29%)
CK1gamma_C 354..439 CDD:463640
F41G3.5NP_495378.2 Protein Kinases, catalytic domain 28..292 CDD:473864 83/282 (29%)
Blue background indicates that the domain is not in the aligned region.

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