DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and F39F10.3

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_510730.1 Gene:F39F10.3 / 185498 WormBaseID:WBGene00018203 Length:298 Species:Caenorhabditis elegans


Alignment Length:309 Identity:71/309 - (22%)
Similarity:133/309 - (43%) Gaps:66/309 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 NFRVGKKIGCGNFGELRLGKNLYNN----------EHVAIKMEPMKSKAPQLHLEYRFYKLLGSH 115
            ::.:.|.:|.|.:||:.|.|:..||          ||..|:   .||.|         ::.|..:
 Worm     9 HYTLEKLLGKGMYGEVHLCKDDRNNEARVAKLILKEHNGIR---DKSWA---------HETLALN 61

  Fly   116 ADNAPDGIPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICA---RKFSLKTVLMIAKQLLHRIEY 177
            |....:|:||::..|:. ..:|.:|::||...||.:  ||.   :||:..|...|..|::..::.
 Worm    62 AVAGVNGVPRMFATGST-DYHNWIVMDLLSDDLEVI--ICRNENKKFAKATGYQILWQVVKILKD 123

  Fly   178 VHSRHLIYRDVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNR--------------HIPY 228
            :||:.:::.|:||.|.::..:|...:.:  ::|||.|:.:.|::.||              ||| 
 Worm   124 IHSKGIVHGDIKPNNLMVSHSSNMFQLV--LVDFGCARRFKDVNGNRTPPAPYPSNCIKGLHIP- 185

  Fly   229 REHKSLTGTARYMSINTHMGREQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTK 293
             .|.:|             |......:|:..:.:: ...||...||:  ..|..|...:|:   .
 Worm   186 -PHSAL-------------GMPHMEAEDIMQVAYL-SCLLRQYAPWK--DDDEFKMTRKKM---S 230

  Fly   294 RATPIEVLCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKG 342
            .|...|...:.| ::....::.:.....:..|||..:..|.|.:....|
 Worm   231 LALNPEKFLEEH-QDLLPVIKLLAAQKHYAEPDYIAILDLLQQMLHSSG 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 71/309 (23%)
S_TKc 62..335 CDD:214567 69/299 (23%)
CK1gamma_C 354..428 CDD:289378
F39F10.3NP_510730.1 PKc_like 9..274 CDD:389743 70/303 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160842
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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