DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and ttbk-3

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_501778.4 Gene:ttbk-3 / 185199 WormBaseID:WBGene00009324 Length:562 Species:Caenorhabditis elegans


Alignment Length:358 Identity:93/358 - (25%)
Similarity:158/358 - (44%) Gaps:58/358 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GVLMVGP----NFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLLGS 114
            |.:::.|    ::.:..:||.|.|.::.:|::|..:::.|:|:|...:....:..|....:||  
 Worm    74 GEIVIAPMMLGDWMITHQIGEGTFAKIFVGRSLPFDQYYAVKIEVRLTSMDFIDHEVTVMRLL-- 136

  Fly   115 HADNAPDGIPRIYHLGTC-----GGRYNAMVLELLGLSLEDLFNICA-RKFSLKTVLMIAKQLLH 173
               :.|:.:|   |:..|     ....|..|:.|||.:|.||...|. |:|...|...:..|:|:
 Worm   137 ---SYPNELP---HIPKCVFFSKQKDLNFFVMTLLGENLRDLKLKCPDRRFLRGTWSRLGIQILY 195

  Fly   174 RIEYVHSRHLIYRDVKPENFLIGRT-STKREKIIHIIDFGLAKEYIDLDTNRHI--PYREHKSLT 235
            .::.:|.:..|:||:||||.|:|.. ..||.:|:|:|||||.:::.........  |.|......
 Worm   196 ALKLMHEKGFIHRDIKPENLLMGAADDRKRSRIVHVIDFGLTRQWAWSKEKAFYARPLRTKVQFR 260

  Fly   236 GTARYMSINTHMGREQSRRDDLEALGHMF-MYFLRGSLPWQGLKADTLKERYQ-KIGDTKRATPI 298
            |:..:.|.|.|:|.:..|:|||.:|  :| :..|...|||.|:|...:..|.: .:|......|.
 Worm   261 GSLNFTSSNAHLGYKLGRKDDLWSL--LFTLVDLNDRLPWHGVKDHMILARQKMNMGVALMKMPK 323

  Fly   299 EVLCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDWTGKTMSTPVGSL 363
            .:      |.|..:|...|.|   :.|:|..:..:.      ||.....|        .||. |.
 Worm   324 TM------ERFFEHLLECRAL---QRPNYHMMFNIL------KGIQSLSE--------DTPT-SK 364

  Fly   364 QTGHEVIISPNKDRHNVTAKTNAKGGVAAWPDV 396
            .|..||.:|.:......|.:         |.:|
 Worm   365 YTFEEVELSEDDLEERFTGE---------WEEV 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 81/303 (27%)
S_TKc 62..335 CDD:214567 78/283 (28%)
CK1gamma_C 354..428 CDD:289378 10/43 (23%)
ttbk-3NP_501778.4 PKc_like 86..351 CDD:389743 78/289 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160835
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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