DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gish and ttbk-6

DIOPT Version :10

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_498080.1 Gene:ttbk-6 / 183478 WormBaseID:WBGene00016673 Length:290 Species:Caenorhabditis elegans


Alignment Length:261 Identity:78/261 - (29%)
Similarity:127/261 - (48%) Gaps:31/261 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 NAPDGIPRIYHLGTCGGRYN--AMVLELLGLSLEDL--FNICARK-FSLKTVLMIAKQLLHRIEY 177
            ||....|.|.:|...|.:.|  .||:.|||.:|:||  .|....| ||..|...:..|.::.::|
 Worm    10 NANGPAPHIPNLNLYGKKMNFSYMVMTLLGRNLQDLESTNFVVNKGFSRGTWSRVGIQWVYALKY 74

  Fly   178 VHSRHLIYRDVKPENFLIG-RTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHK--------- 232
            ||....|:|:|..:|..:| ...::|.|||||:||||.:.:    ...|.  ||:|         
 Worm    75 VHYNGFIHRNVNTQNLFLGNEKDSERAKIIHILDFGLGRPF----ARYHA--RENKWIVRIARHS 133

  Fly   233 -SLTGTARYMSINTHMGREQSRRDDLEALGHMFMYFLRG-SLPWQGLKADTLKERYQKIGDTKRA 295
             ...|:.||.|.|.|:.:||.|.||:.:|.::.:....| :||||   .|..:.|.:::  ....
 Worm   134 AEFRGSFRYASPNVHLRKEQGRVDDVWSLPYVIIELNGGKALPWQ---TDYRRGRVEQM--KLNL 193

  Fly   296 TPIEVLCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDWTGK--TMST 358
            ||.:|:.| .|......:.::..|::::.||...:.:.|..:.:.:..|...:|||..:  .||.
 Worm   194 TPKDVMSD-MPACMDKLMPHLASLNYYQRPDDHMIFKCFWQVMENEKITPSSKFDWENEEPDMSV 257

  Fly   359 P 359
            |
 Worm   258 P 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 75/252 (30%)
CK1gamma_C 354..439 CDD:463640 3/8 (38%)
ttbk-6NP_498080.1 Protein Kinases, catalytic domain 1..231 CDD:473864 70/232 (30%)

Return to query results.
Submit another query.