DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and ttbk-5

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_501832.1 Gene:ttbk-5 / 182232 WormBaseID:WBGene00007305 Length:373 Species:Caenorhabditis elegans


Alignment Length:434 Identity:117/434 - (26%)
Similarity:178/434 - (41%) Gaps:106/434 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 FRVGKKIGC---------GNFGELRLGKNLYNNEHVAIKMEPMKSK-APQLHLEYRFYKLLGSHA 116
            |::||:.|.         |.||::.|.:: .:.:..|:|.|....: ...:.||....:.|.   
 Worm    18 FKIGKRFGSYTIEKSLDEGGFGQVYLVRD-NSGKRFALKAESNDMEGGSAIKLEALILRKLN--- 78

  Fly   117 DNAPDG-----IPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICAR-KFSLKTVLMIAKQLLHRI 175
                ||     :|::...|. ..:|..||:.|||.:|:.|.|...: :|:..|...|..|.|:.:
 Worm    79 ----DGESVIHVPKLLLSGK-RKKYCYMVMTLLGKNLKCLKNKRPKERFTRGTWSRIGIQCLYGL 138

  Fly   176 EYVHSRHLIYRDVKPENFLIGRTSTK-REKIIHIIDFGLAKEYIDL-DTNRHIPYREHK---SLT 235
            :|:|....::||:||:||::|....| |.:|:||:|||||:.:... ::::....|..:   ...
 Worm   139 KYMHDCGFVHRDIKPQNFMMGNEDDKERARIVHILDFGLARSFAKFSESSKTWSARRARGTAEFR 203

  Fly   236 GTARYMSINTHMGREQSRRDDLEALGHMFMYF-LRGSLPWQGLKADTLKERYQKI---GDTKRAT 296
            ||.||.|.|.|..:||.|.||:.:|  :|:.. |.|.||||.::.....|..:.|   .|.....
 Worm   204 GTLRYTSPNVHFRKEQGRVDDIWSL--LFVLIELNGGLPWQNVQKREEVEAMKMIMTDQDVMLNM 266

  Fly   297 PIEVLCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDWTGKTMSTPVG 361
            | ..:||..|        :.|.||.:..|||..:.:....:...:|.|....|||   ..|.|..
 Worm   267 P-PCMCDIIP--------HFRTLDCYMRPDYLLVFKALWQVMLNEGQTTSSRFDW---ETSDPDP 319

  Fly   362 SLQTGHEVIISPNKDRHNVTAKTNAKGGVAAW--PDVPKPGATLGNLTPADRHGSVQVVSSTNGE 424
            |        |||                 |.|  ||        |.....|:.|       .||.
 Worm   320 S--------ISP-----------------ADWENPD--------GRFFKLDKIG-------INGP 344

  Fly   425 LNPDDPTAGHSNTPITQQPEVEVVDETKCCCFFKRKKKKSTRQK 468
             .|.|..|..|    |||.:.           .|..|.:|..||
 Worm   345 -PPMDKCAAES----TQQGDA-----------LKSDKGRSVNQK 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 90/316 (28%)
S_TKc 62..335 CDD:214567 85/297 (29%)
CK1gamma_C 354..428 CDD:289378 15/75 (20%)
ttbk-5NP_501832.1 PKc_like 27..295 CDD:389743 81/287 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160834
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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