DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and B0218.5

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_501367.1 Gene:B0218.5 / 181853 WormBaseID:WBGene00015049 Length:367 Species:Caenorhabditis elegans


Alignment Length:379 Identity:102/379 - (26%)
Similarity:156/379 - (41%) Gaps:68/379 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SNNMYSTRQSVSTTTGVLMVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLH 103
            :|..:.|::.            .::|...:|.|.:|.:.....|.:.|..|||.|...:....|:
 Worm    13 NNEEFKTKKD------------RYKVLALLGKGGYGAVYSVLRLSDMEKFAIKCENAAACRKALY 65

  Fly   104 LEYRFYKLLGSHADNAPDGIPRIYHLGTC--------GGRYNAMVLELLGLSLEDL-FNICARKF 159
            ::....|           |..:|.....|        ..|:|.:|::|:|.:|.|| .:....:|
 Worm    66 MDCNVLK-----------GAAKIQSRHFCTVIDQAAVKNRFNFIVMKLIGKNLWDLRMDTAECRF 119

  Fly   160 SLKTVLMIAKQLLHRIEYVHSRHLIYRDVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNR 224
            :..|.|..|.|.|..||.:|....::||:||.||.:||..:.....|.::||||.:|::.....|
 Worm   120 TKGTSLKAASQCLISIEELHRFGFLHRDIKPGNFAVGRKESNEHHTIFMLDFGLCREFVKRGEGR 184

  Fly   225 HIPYREHKSLTGTARYMSINTHMGREQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKI 289
            ....|......||.||..||:.:..:..|:||:|:..:|...:..|.|||:..|| |.:|:..|.
 Worm   185 LRTQRAKSQFRGTTRYAPINSMLEIDTGRKDDIESWLYMVAEWTSGGLPWRKFKA-TEREKVLKY 248

  Fly   290 GDTKRATPIEVLCD---GHP-EEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFD 350
            ....| |..|::.|   ..| :||...|:||..|||:..|||.|:....|.........|....|
 Worm   249 KKDVR-TDKEIMADLFYNCPLKEFERILKYVDELDFYSEPDYKFVYCCLQHAAAASKIKDTDPLD 312

  Fly   351 W--------------TGKT--------MSTPVGSLQTGHEVIISPNKDRHNVTA 382
            |              .||.        |||.|...:||        :||....|
 Worm   313 WDPNVPYMGPIETIGDGKVIELDVDQGMSTEVSFNKTG--------RDRETADA 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 89/319 (28%)
S_TKc 62..335 CDD:214567 85/285 (30%)
CK1gamma_C 354..428 CDD:289378 10/37 (27%)
B0218.5NP_501367.1 PKc_like 23..297 CDD:389743 85/286 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S538
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

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