DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and C38C3.4

DIOPT Version :10

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001023703.2 Gene:C38C3.4 / 178641 WormBaseID:WBGene00016513 Length:330 Species:Caenorhabditis elegans


Alignment Length:317 Identity:85/317 - (26%)
Similarity:136/317 - (42%) Gaps:52/317 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 FRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLLGSHADNAPDGIPRI 126
            :.||||:..|.:|.:.......:.:..|.|:|..::.:..|..:   |.::...|....:.:.|:
 Worm    36 YAVGKKVAQGRYGAVYEVLRRSDGKPFACKLEICEAHSHGLDQD---YSVMTKAAKRGAENLVRM 97

  Fly   127 YHLGTCGGRYNAMVLELLGLSLEDL-FNICARKFSLKTVLMIAK------QLLHRIEYVHSRHLI 184
            ...|.....:..:::.|||.:|.:| |.....:|||.|.|.:|.      |.||::.|||     
 Worm    98 IDRGKIEEHFKFIIMPLLGENLMNLRFLFEDGRFSLSTGLRLALFAIQPIQSLHQLGYVH----- 157

  Fly   185 YRDVKPENFLIGRTSTKREKIIH---------IIDFGLAKEYIDLDTNRHIPYREHKSLTGTARY 240
             ||:|..||.|.     ..:::|         :||:|:.:.:.|.......|..:.| ..||.||
 Worm   158 -RDIKASNFCIA-----DPQMLHQNPEALKLCLIDYGICRSFKDKSGELKTPRTDIK-FRGTNRY 215

  Fly   241 MSINTHMGREQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLC--- 302
            .|:..|.|.|||.:||:|:..:|.:..:.|:|||..:..|..||    :...|.|      |   
 Worm   216 ASLAAHYGDEQSAKDDMESWFYMMIELISGNLPWSFMHRDQHKE----VASMKEA------CRTT 270

  Fly   303 DGH-------PE-EFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDW 351
            ||.       |. ||.....|:..|.:..|.||.|:..:.|......|.....:|||
 Worm   271 DGSLIMMKFCPRVEFHRIQAYLMGLKYQNTVDYTFISEMVQLAMRNNGVRMNEKFDW 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 85/317 (27%)
CK1gamma_C 354..439 CDD:463640
C38C3.4NP_001023703.2 Protein Kinases, catalytic domain 36..308 CDD:473864 80/296 (27%)
Blue background indicates that the domain is not in the aligned region.

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