DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and K09C6.8

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001343667.1 Gene:K09C6.8 / 178590 WormBaseID:WBGene00019562 Length:551 Species:Caenorhabditis elegans


Alignment Length:354 Identity:76/354 - (21%)
Similarity:128/354 - (36%) Gaps:113/354 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 AGGKSSSNNM-YSTRQSVSTTTGVLMVGPNFR---VGKKIGCGNF---------GEL------RL 78
            |.||:....: |..:..|..|...:.:..||:   .|.|:..|||         |.:      .|
 Worm    34 APGKTGWKRVTYENKFPVVQTLNSVEIESNFKHISKGTKVMLGNFPMTPKDDVIGNMGMVVCRYL 98

  Fly    79 GKNLYNNE------HVAIKMEPMKSKAPQLHLEYRFYKLLGSHADNAPDGIPRIYHLGTCGGRYN 137
            ..|.|:..      ..||..:...||..|:     ..||..:.:.||    .|:...|.......
 Worm    99 ALNQYHQTIYHFHFRAAINFDSAGSKEAQI-----LSKLNMNRSHNA----MRVMRYGQYLNLQY 154

  Fly   138 AMVLEL---LGLSLE----DLFNICARKFSLKTVLMIAKQL-----LHRIEYVHSRHLIYRDVKP 190
            .:..||   ||..::    |||:         :|.:|.:..     ||:|.|.|      .|::|
 Worm   155 ILTQELSSDLGFIVQNTTLDLFS---------SVHLIQQTFYCISDLHKIGYTH------LDIRP 204

  Fly   191 ENFLIGRTSTKREKIIHIIDFGLAKEYIDLDT----NRHIPYREHKSL-------TGTARYMS-- 242
            .:|.:.|.:    |.:.:::     .:.:.:|    :|:|...:|..|       ...||..|  
 Worm   205 SSFSLLRNN----KAVVVLN-----SFFNSETRQNISRNIRTTKHNGLQPLYVQQARHARNKSER 260

  Fly   243 -------INTHMGREQSRR------DDLEALGHM---FMYFLRGSLPW--QGLKAD------TLK 283
                   |||:|.|.|..|      ||.|:..::   |:..|...|.:  |..|.|      .::
 Worm   261 EPLPKNVINTYMSRRQHFRLARGPADDYESWFYICARFITLLSSDLGFIVQNTKLDLYSAVHLIQ 325

  Fly   284 ERYQKIGDTKRA--TPIEVLCDGHPEEFA 310
            :.:..|.|..:.  |.:::    .|..|:
 Worm   326 QTFYCISDLHKIGYTHLDI----RPSSFS 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 70/325 (22%)
S_TKc 62..335 CDD:214567 69/324 (21%)
CK1gamma_C 354..428 CDD:289378
K09C6.8NP_001343667.1 SPS1 88..>222 CDD:223589 34/166 (20%)
PKc_like <179..>300 CDD:328722 31/135 (23%)
PKc_like <299..461 CDD:328722 10/56 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160776
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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