DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and ttbk-4

DIOPT Version :10

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_501824.1 Gene:ttbk-4 / 177871 WormBaseID:WBGene00012169 Length:366 Species:Caenorhabditis elegans


Alignment Length:316 Identity:93/316 - (29%)
Similarity:154/316 - (48%) Gaps:48/316 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 NFRVGKKIGCGNFGELRLGKNLYNNEHV--------------AIKMEPMKSKAPQLHLEYRFYKL 111
            ::::||.|..|.||::.:..::.:.:.|              |||:|.|               :
 Worm    23 DWKIGKTIDEGGFGKVYIATSISDPKKVAALKAESNEIEGGSAIKLEAM---------------I 72

  Fly   112 LGSHADNAPDGIPRIYHLGTCGGR--YNAMVLELLGLSLEDLFN---ICARKFSLKTVLMIAKQL 171
            |.....|.|  :|.|..:..|..|  |..||:.|||.:|..|.:   :....||..|...|..|.
 Worm    73 LNKLNANGP--VPHIPVVHLCAKRKLYCYMVMTLLGRNLRKLKSTNLVVNNGFSRGTWSRIGIQC 135

  Fly   172 LHRIEYVHSRHLIYRDVKPENFLIG-RTSTKREKIIHIIDFGLAKEY--IDLDTNRHIPYREH-- 231
            |:.::|||....|:|||||:|||:| .|.::|.:|:||:|||||:.:  .....|:.|..|..  
 Worm   136 LYALKYVHDNGFIHRDVKPQNFLLGNETDSERARIVHILDFGLARPFAVFHARENKWIARRARGT 200

  Fly   232 KSLTGTARYMSINTHMGREQSRRDDLEALGHMFMYFLRG-SLPWQGLKADTLKERYQKIGDTKRA 295
            ....||.||.|.|.|:.:||.|.||:.:|.::.:....| :||||   .|:.:||.:::   |..
 Worm   201 AEFRGTLRYTSPNVHLRKEQGRVDDVWSLLYVIIELNGGKALPWQ---TDSQRERVEQM---KLN 259

  Fly   296 TPIEVLCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDW 351
            .|.:|:....|......:.::..||:::.|||..:.:.|..:.:.:..|...::||
 Worm   260 LPAKVVMSNMPACMDKVMPHLASLDYYQRPDYHMIFKCFWQVMENEKITPSSKYDW 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 93/316 (29%)
CK1gamma_C 354..439 CDD:463640
ttbk-4NP_501824.1 Protein Kinases, catalytic domain 24..298 CDD:473864 89/296 (30%)
Blue background indicates that the domain is not in the aligned region.

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