DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and ttbk-8.2

DIOPT Version :10

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_500837.1 Gene:ttbk-8.2 / 177341 WormBaseID:WBGene00016541 Length:308 Species:Caenorhabditis elegans


Alignment Length:300 Identity:79/300 - (26%)
Similarity:135/300 - (45%) Gaps:33/300 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 VGKKIGCGNFGEL-----RLGKNLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLLGSHADNAPDGI 123
            :.||:|.|.||.:     ..||       .|:|:|....:...|.||......|....:.   ..
 Worm    19 IEKKLGEGGFGAVYRVFDATGK-------YAMKVEGANEQIQVLKLEVSVLNELSKRGNR---HF 73

  Fly   124 PRIYHLGTCGGRYNAMVLELLGLSLEDLFNI-CARKFSLKTVLMIAKQLLHRIEYVHSRHLIYRD 187
            .:|...|.. |.:|.:|:.|:|.||:||... .....|:...:.|..|.|..:|.:|:...::||
 Worm    74 CKIEDKGRF-GNFNYVVMTLVGKSLQDLNKAGVGGHMSMGCSIGIGIQSLEALEDLHNIGYLHRD 137

  Fly   188 VKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGREQS 252
            |||.|:.|||......:.::|:|||:.:::...|.....| |:.....||.:|..|:.|:.||..
 Worm   138 VKPGNYTIGRPELNEIRKVYILDFGMCRKFTGNDGTIRKP-RQAAGFRGTVKYAPISCHLQRELC 201

  Fly   253 RRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA------TPIEVLCDGHPEEFAT 311
            |:||||...:|.:....|::|||.:      ....::|..|:|      |.....|   |::|..
 Worm   202 RKDDLETWMYMQVELSHGTIPWQHI------SDMNQVGQAKQAIRNNLGTLFPPPC---PQQFQD 257

  Fly   312 YLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDW 351
            .:|.|..:.:::.|:|..:..:.:..:...|..:...:||
 Worm   258 IMRMVDAMKYYDAPNYQAIYGMMRQAYGACGSNENAPYDW 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 78/299 (26%)
CK1gamma_C 354..439 CDD:463640
ttbk-8.2NP_500837.1 STKc_TTBK 16..281 CDD:270919 76/282 (27%)
Blue background indicates that the domain is not in the aligned region.

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