DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and spe-6

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_499482.1 Gene:spe-6 / 176582 WormBaseID:WBGene00004960 Length:379 Species:Caenorhabditis elegans


Alignment Length:355 Identity:98/355 - (27%)
Similarity:162/355 - (45%) Gaps:39/355 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 FRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKA-PQLHLEYRFYKLLGSHADNAPDGIPR 125
            ::|.:.|..|.|.::.:..:...||..|:|.|..:..: |.|.|:     ::...|.....|.|.
 Worm    26 WKVLRNIYSGPFSDVYVVADTVTNEKYAMKCERQEGNSRPVLKLD-----VMVLMATKGLRGFPN 85

  Fly   126 IYHLGTCGGR---YNAMVLELLGLSLEDLFNI-CARKFSLKTVLMIAKQLLHRIEYVHSRHLIYR 186
            .    ...||   |...:::|:|..|..|... ..|||||.|.|.|..|.|.|:|.:|:...:.|
 Worm    86 F----VAAGRTDVYRYCIMQLVGPDLGRLRRTRPERKFSLPTALQILGQTLRRLEDLHNCGWLCR 146

  Fly   187 DVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGREQ 251
            |||..||.||  ..:.|..::|:|||.|::::|.: .:.||.|...:|.||.:|.:::.|..::|
 Worm   147 DVKAPNFCIG--VGENESTVYILDFGFARKFVDKE-GKIIPPRTAAALMGTFQYCAVSAHSHKDQ 208

  Fly   252 SRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVL----CDGHPEEFATY 312
            ..|||||:..:|.:..|:|.|||..:..   .:.:::||:.|.|...|.|    .:|.|::|...
 Worm   209 CARDDLESWFYMGIELLKGPLPWANIDG---HKNHKQIGEAKVAIRSEPLRSEFFEGVPKQFNEI 270

  Fly   313 LRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDW-TGKTMSTPVGSLQTGHEVIISPNKD 376
            |..:.:..:|:.|:|..|..|..........|.:...|| ..:.|....        :.:....:
 Worm   271 LTILDQTSYFDRPNYKKLGDLLSQAATEHQVTLKEPLDWQNNERMQQKA--------IFVGELGE 327

  Fly   377 RHNVTAKTNAKGGVAAWPDV------PKPG 400
            .|..:||.:||.......|:      ||.|
 Worm   328 SHQASAKLDAKDNANESMDIEFDDMPPKEG 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 88/301 (29%)
S_TKc 62..335 CDD:214567 85/281 (30%)
CK1gamma_C 354..428 CDD:289378 10/53 (19%)
spe-6NP_499482.1 STKc_TTBK 25..293 CDD:270919 85/281 (30%)
S_TKc 26..271 CDD:214567 79/259 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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