DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and C28A5.6

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_497900.2 Gene:C28A5.6 / 175579 WormBaseID:WBGene00007791 Length:1064 Species:Caenorhabditis elegans


Alignment Length:497 Identity:87/497 - (17%)
Similarity:171/497 - (34%) Gaps:93/497 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 QSVSTTTGVLMVGPNFRVG-----KKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEY 106
            :|.|:|:....:..|.:.|     |.:...|...|:|.|||.....:...:.|..|.        
 Worm   449 ESNSSTSNQFWLVQNIKSGCMCSAKLVSRKNPEHLQLQKNLDKERKILYDLLPELSN-------- 505

  Fly   107 RFYKLLGSHADNAPDGIPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQL 171
                         |..|.|:..:| ....:..::.|..|:.|..||:......:..|:.:|:...
 Worm   506 -------------PSHIARLVDIG-YDDDFKFLIFEDFGMDLLTLFDEFGAVLNPTTMFLISYFT 556

  Fly   172 LHRIEYVHSRHLIYRDVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTG 236
            .:.|:.:||..:::.|::|.:|.:.:         |..:..:.      |.:|.:..:....:..
 Worm   557 FNAIKELHSFDIVHLDIRPSSFSVNQ---------HPFNIKIT------DYSRCMTRKPEMKVPD 606

  Fly   237 TARYMSINTHMGREQSRR----DDLEALGHMFMYFLRG-SLPWQGLKADTLKERYQKIGDTKRAT 296
            .||..|.:..:..::..:    .|.||..:..::.... .|||.|...:..|.:.....|     
 Worm   607 DARPDSFSPRVFHQKDAQFDEFVDFEAWVYTMLFLCTAEKLPWFGDAENMFKLKEVFFND----- 666

  Fly   297 PIEVLCDGHPE-----------EFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFD 350
            |:..|.||..:           :..||..::.:::...:.|.    ..:.|....:.||.: |.:
 Worm   667 PLNYLYDGCADFVPLVACFIANKKLTYETFMEKMNLIFSVDV----MQYSDKEQPRLYTMK-ELE 726

  Fly   351 WTGKTMSTPVGSLQTGHEVII-------SPNKDRHNVTA--KTNAKGGVAAWPDVPKPGATLGNL 406
            ...||...|  ...|.:.:.:       :...|..|:.|  :.|.:...||.....:........
 Worm   727 EVKKTRRAP--DFYTNNAIDLVEGHWHAADESDHDNLKASDEENEQKSAAARKSKSEKKKDSCER 789

  Fly   407 TPADRHGSVQVVSSTNGELNPDD---------PTAGHSNTPITQQPEVEVVDE--TKCCCFFKRK 460
            :.|:.....:..||...|.:..|         .:|........:.|..|..|:  |:.....:|:
 Worm   790 SSAETSSCTEQTSSPMSEASSSDGRKKPKKAGKSAERKEKSAERNPSSEKDDDGATEAMIGVERR 854

  Fly   461 KKKSTRQKXLDG-VQCSPEREAVTLLRATSHSNSRDSVLNNP 501
            ...|...| ..| .:..||::...  |..:.:....|.|:.|
 Worm   855 STPSDVVKNKKGRAKGDPEKQKQD--RKENKTEEEKSKLSEP 894

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 54/313 (17%)
S_TKc 62..335 CDD:214567 49/293 (17%)
CK1gamma_C 354..428 CDD:289378 14/82 (17%)
C28A5.6NP_497900.2 SPS1 457..>663 CDD:223589 42/242 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160828
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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