DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and kin-19

DIOPT Version :10

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001369852.1 Gene:kin-19 / 175524 WormBaseID:WBGene00002202 Length:341 Species:Caenorhabditis elegans


Alignment Length:298 Identity:154/298 - (51%)
Similarity:207/298 - (69%) Gaps:12/298 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 MVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLLGSHADNAPD 121
            :|...:::.:|||.|:||::.:..|:.|.|.||||:|..:::.|||..|.:.|::|....     
 Worm    11 IVATKYKLIRKIGSGSFGDIYVSINVTNGEEVAIKLESNRARHPQLLYESKVYRILQGGV----- 70

  Fly   122 GIPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIYR 186
            |||.|...|| ...||.:|::|||.|||||||.|:|:|::|||||:|.|::.||||||.::.|:|
 Worm    71 GIPHIRWYGT-EREYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMIGRIEYVHVKNFIHR 134

  Fly   187 DVKPENFL--IGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGR 249
            |:||:|||  |||...|    :.:|||||||:|.|..|..||||||.|:|||||||.|||.|:|.
 Worm   135 DIKPDNFLMGIGRHCNK----LFLIDFGLAKKYRDSRTRTHIPYREDKNLTGTARYASINAHLGI 195

  Fly   250 EQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCDGHPEEFATYLR 314
            |||||||:|:||::.|||.||:||||||||.|.|::|:||.:.|..|.:|.||.|.|.||..||.
 Worm   196 EQSRRDDMESLGYVLMYFNRGTLPWQGLKAATKKQKYEKISEKKMTTSVEHLCKGFPAEFPMYLS 260

  Fly   315 YVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDWT 352
            |.|.|.|.|:|||.:||:||:.||....:..:..||||
 Worm   261 YTRGLRFDESPDYMYLRQLFRILFRTLNHQYDYTFDWT 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 153/294 (52%)
CK1gamma_C 354..439 CDD:463640
kin-19NP_001369852.1 STKc_CK1_alpha 15..280 CDD:271030 145/274 (53%)
Blue background indicates that the domain is not in the aligned region.

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