DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and C56C10.6

DIOPT Version :10

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_495333.1 Gene:C56C10.6 / 174087 WormBaseID:WBGene00016963 Length:422 Species:Caenorhabditis elegans


Alignment Length:383 Identity:103/383 - (26%)
Similarity:169/383 - (44%) Gaps:64/383 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NATTALAGGKSSSNNMYSTRQSVSTTTGVLMVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIK 91
            |.|..|..||                    :||.:::|.:|:|.|..|.:.|.|||.:....|:|
 Worm     9 NGTVELPKGK--------------------IVGCSWQVIRKLGEGGCGSVYLVKNLEDETEAAMK 53

  Fly    92 MEPMKSKAP-QLHLEYRFYKLLGSHADNAPDGIPRIYHLGTCGGRYNA-------MVLELLGLSL 148
            .|...:... .|.||....|.|        .|.|.:     |...:.|       :::.|||.||
 Worm    54 AESNGAAGGCVLKLEVAILKKL--------SGKPHV-----CQFLFAARLTDFTYVIMTLLGESL 105

  Fly   149 EDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIYRDVKPENFLIG-RTSTKREKIIHIIDFG 212
            ..:....||:.::.:.:.||..:|..::.:|....|:||:||.|..:| :|:....:..|::|||
 Worm   106 NKIVKRIARQITVSSQVRIAANVLFCLKQIHDIGFIHRDLKPANMALGYKTNNDECRFFHVLDFG 170

  Fly   213 LAKEYIDLDTNRHIPY-----REHKSLTGTARYMSINTHMGREQSRRDDLEALGHMFMYFLRGSL 272
            ||::::...:::....     ||.....||.||.||..|...||.|.|||.::.:: :..|||.|
 Worm   171 LARQFVVSQSDQPSKLMMRRPRERSLFRGTTRYCSIRMHDRAEQGRVDDLWSMVYL-LAELRGPL 234

  Fly   273 PWQGLKADTLKERYQKIGDTKRATPIEVLCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDL 337
            ||.. ::|.     :.:|:.||....||:....|.||....:|:|.|.:|..|||..:..|...:
 Worm   235 PWSS-QSDK-----RVVGEMKRLHSDEVVLQNSPMEFLEIAKYLRSLTYFHRPDYHKIFMLLISV 293

  Fly   338 FDRKGYTDEGEFDW-----TGKTMSTPVGSL-----QTGHEVIISPNKDRHNVTAKTN 385
            ..:..:.....|||     |..:.|||..|:     |...|.:...::::.....||:
 Worm   294 MSKGKFAWNDPFDWEMPISTTPSKSTPSKSVTKSPAQLSKETVKKASREKTLSKEKTS 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 88/311 (28%)
CK1gamma_C 354..439 CDD:463640 8/37 (22%)
C56C10.6NP_495333.1 Protein Kinases, catalytic domain 24..290 CDD:473864 83/285 (29%)
CAF-1_p150 <326..>407 CDD:402959 4/26 (15%)

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