DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and T05A7.6

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_494824.1 Gene:T05A7.6 / 173804 WormBaseID:WBGene00020223 Length:758 Species:Caenorhabditis elegans


Alignment Length:345 Identity:90/345 - (26%)
Similarity:143/345 - (41%) Gaps:67/345 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 RQSVSTTTGVLMVG--PNFRVGKKIGCGNFGELRL--GKNLYNNEHVAIKMEPMKSKAPQLHLEY 106
            |:.:|:...:|.||  ..::|...:|.|.||::..  .::..:|:..|:|.|..:.:...|.|:.
 Worm   422 RKKLSSGDVILGVGATDGWKVVNLLGSGGFGDVYKVHRESQASNKCYALKTESEEGEKRYLRLKV 486

  Fly   107 R---FYKLLGSHADNAPDGIPRIYHLGTCGG-RYNAMVLELLGLSLEDLFNICARK-----FSLK 162
            .   ..|......||...........|.|.. :...:|:.|:|.||||:    .||     ||..
 Worm   487 EVTVMMKTAEKKKDNKFKNFIEFVDRGKCEQLKCKFVVMGLVGPSLEDI----RRKYLLASFSKH 547

  Fly   163 TVLMIAKQLLHRIEYVHSRHLIYRDVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIP 227
            |...:|.|.:..:..:||...::||:||.|:.:|  ..:||..::::|||:||.|:| :...|..
 Worm   548 TSFNVAIQTVTALRDLHSLGYLHRDIKPANYAVG--LDEREDTVYMLDFGIAKLYVD-ENGVHKI 609

  Fly   228 YREHKSLTGTARYMSINTHMGREQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDT 292
            .|:.....||.||......|.:||.|:||||.              |..|..|.:.|.:      
 Worm   610 KRKKVKFLGTLRYACRACMMQQEQGRKDDLET--------------WIYLVFDLMDEAH------ 654

  Fly   293 KRATPIEVLCDGHPEE--------FATY---------------LRYVRRLDFFETPDYDFLRRLF 334
              ..|...|||  |.|        |||:               :.||..:.:..||||.::....
 Worm   655 --GMPWRALCD--PREILKSKNTFFATFDNFQFSNILKRLKDLVVYVDDMQYDTTPDYSYILNFL 715

  Fly   335 QDLFDRKGYTDEGEFDWTGK 354
            :...:..|.....:.||.||
 Worm   716 KTTANDVGAKITKKLDWMGK 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 83/326 (25%)
S_TKc 62..335 CDD:214567 80/306 (26%)
CK1gamma_C 354..428 CDD:289378 1/1 (100%)
T05A7.6NP_494824.1 SPS1 100..>321 CDD:223589
PKc_like 116..368 CDD:304357
SPS1 439..>623 CDD:223589 52/190 (27%)
PKc_like 440..716 CDD:304357 80/306 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160791
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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