DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and C34B2.3

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_492794.2 Gene:C34B2.3 / 172964 WormBaseID:WBGene00016388 Length:351 Species:Caenorhabditis elegans


Alignment Length:308 Identity:89/308 - (28%)
Similarity:144/308 - (46%) Gaps:28/308 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 VGPNFRVGKKIGCGNFGELRLGKN-LYNNEHV-------AIKMEPMKSKAPQLHLEYRFYKLLGS 114
            :|.|::|.|.|      :...|.| :|..|||       |:|:| .|::|.:: |::..:.||..
 Worm    38 IGKNWKVVKAI------QSDKGFNTIYVAEHVQKKKKMAAVKVE-RKTEAIKM-LQFELFVLLTV 94

  Fly   115 HADNAPDGIPRIYHLGTCGGRYNAMVLELLGLSLEDL-FNICARKFSLKTVLMIAKQLLHRIEYV 178
            ...|......:::..|. ...||.:.:.|.|.||..| .|....|.::...|.:|:|.|..:|.:
 Worm    95 EKKNQCKQFCKLFEKGN-EKEYNWIAITLCGKSLRALRKNQPTGKLTVACGLSVAQQCLKGLEEL 158

  Fly   179 HSRHLIYRDVKPENFLIGRTSTKRE---KIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARY 240
            |....|:|:|.|..|.|||.:...:   :.|:|:|||.|.:|:..|.....|........|:.|:
 Worm   159 HRMGFIHRNVAPSVFAIGRYTGDNQSDLRNIYILDFGFAHQYMIKDGTLKPPSAHPWKYVGSLRH 223

  Fly   241 MSINTHMGREQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCDGH 305
            |....:...|.||.:|||...:|.:..::|.|||..||.......|||:  .:....:..:..|.
 Worm   224 MPRAAYSKVEFSRMEDLEMWFYMSVELVKGCLPWAHLKKPKEVHDYQKL--CRNGLQMREMLGGL 286

  Fly   306 PEEFATYLRYVRRLDFFETPDYDFLRRLFQD--LFDRKGYTDEGEFDW 351
            |.||...::.|.:|.|.:||:|..:..|..:  ||..|   :|..:||
 Worm   287 PPEFVDIMQIVDKLSFTDTPNYTEIYGLLTNAILFSGK---NEFPYDW 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 88/305 (29%)
S_TKc 62..335 CDD:214567 81/284 (29%)
CK1gamma_C 354..428 CDD:289378
C34B2.3NP_492794.2 STKc_TTBK 41..316 CDD:270919 82/285 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160844
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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