DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gish and H05L14.1

DIOPT Version :10

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_492198.1 Gene:H05L14.1 / 172575 WormBaseID:WBGene00010366 Length:794 Species:Caenorhabditis elegans


Alignment Length:376 Identity:91/376 - (24%)
Similarity:157/376 - (41%) Gaps:77/376 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VANATTALAGGKSSSNNMYSTR-----QSVSTTTGVLMVGP-NFRVGKKIGCGNFGELRLGKNLY 83
            :..|.....|.|.|.::.:..:     :.:.....|:..|. .::|.:.:|.|.||::   ..::
 Worm   418 IKTAAEKSTGNKCSGDDDFEFKTARPVRKIMNPDDVITNGQYAWKVVRLLGSGGFGDV---YKVF 479

  Fly    84 NNE-------HVAIKMEPMKSKAPQLHLEYRFYKLL----------GSHADNAPDGIPRIYHLGT 131
            :::       |.|:|.|....|...|.|:.....::          |....:..|.|.|      
 Worm   480 DDKAKGPKKTHYALKTESEGGKKAMLRLKVEMQVMITISDARKKSKGDVNRHFVDFIDR------ 538

  Fly   132 CGGRYNAM-----VLELLGLSLEDLFNICARKFSL-----KTVLMIAKQLLHRIEYVHSRHLIYR 186
              |:...:     |:.|:|.||:|    |.|||.:     .|..:||.|.|..|..:|:...::|
 Worm   539 --GKSEELKCKYIVMSLVGPSLDD----CRRKFGVNLSNTSTPYIIAIQTLESIRDLHNLGYLHR 597

  Fly   187 DVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGREQ 251
            |:||.||.:|..:  :|..:.::|||:.:.|:|..|.:|...|:.....||.||.|....:..:|
 Worm   598 DIKPANFAVGVGA--KESTVFMLDFGIGRSYLDPKTKQHRAPRKKVKFLGTLRYASRACMLEVDQ 660

  Fly   252 SRRDDLEALGHMF--MYFLRGSLPWQGLKADTLKERYQ-KIGDTKRATPIEVLCDGH------PE 307
            .|:||||...:|.  ::..:..:.|:       |:|.: ||.:.|     ::..||.      |.
 Worm   661 GRKDDLECWIYMVFDIFDPKNGVSWK-------KQRDRVKIREAK-----QLFFDGKAQYDYAPI 713

  Fly   308 EFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGY----TDEGEFDWTGK 354
            .....:.|:..|.|..||:|..|.:.........||    .|:|  .|.||
 Worm   714 SLRPIIIYINSLQFQTTPEYANLVKTLYTSSSASGYPIHSLDDG--GWVGK 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 83/332 (25%)
CK1gamma_C 354..439 CDD:463640 1/1 (100%)
H05L14.1NP_492198.1 Protein Kinases, catalytic domain 137..385 CDD:473864
Protein Kinases, catalytic domain 461..736 CDD:473864 77/303 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.