DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gish and ttbk1a

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_009304405.1 Gene:ttbk1a / 100332125 ZFINID:ZDB-GENE-100609-4 Length:1298 Species:Danio rerio


Alignment Length:511 Identity:153/511 - (29%)
Similarity:227/511 - (44%) Gaps:73/511 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 AGNVANATTALAGGKSSSNNMYSTRQSVSTTTGVLMVGPNFRVGKKIGCGNFGELRLGKNLYNNE 86
            |..|.:....||.....:.||..|.:.........||...::|.||||.|.|||:....:|...|
Zfish    10 AARVLSGLQCLAPALQDNANMNGTAEQQDILPPHCMVKDRWKVLKKIGGGGFGEIYEALDLLTRE 74

  Fly    87 HVAIKMEPMKSKAPQLHLEYRFYKLLGSHADNAPDGIPRIYHLGTCG--GRYNAMVLELLGLSLE 149
            :||:|:|..:.....|.:|....|.|        .|...:.....||  .::|.:|::|.|.:|.
Zfish    75 NVALKVESAQQPKQVLKMEVAVLKKL--------QGKNHVCKFIGCGRNDKFNYVVMQLQGRNLA 131

  Fly   150 DLFNICAR-KFSLKTVLMIAKQLLHRIEYVHSRHLIYRDVKPENFLIGR-TSTKREKIIHIIDFG 212
            ||.....| .|::.|.|.:.||:|..||.:||...::||:||.||.:|| .||.|:  .:::|||
Zfish   132 DLRRSQPRGTFTMSTTLRLGKQILESIEAIHSVGFLHRDIKPSNFAMGRLPSTFRK--CYMLDFG 194

  Fly   213 LAKEYIDLDTNRHI-PYREHKSLTGTARYMSINTHMGREQSRRDDLEALGHMFMYFLRGSLPWQG 276
            ||::|  .:||..: |.|......||.||.|:|.|..:|..|.|||.:|.:|.:.|..|.|||:.
Zfish   195 LARQY--TNTNGEVRPPRTVAGFRGTVRYASVNAHKNKEMGRHDDLWSLFYMLVEFAAGQLPWRK 257

  Fly   277 LK----ADTLKERYQKIGDTKRATPIEVLCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDL 337
            :|    ...:||||..          .:|....|.||..:|.:|..||::..|||..|..:|::.
Zfish   258 IKDKEQVGQIKERYDH----------RMLLKHMPSEFNVFLEHVLALDYYTKPDYQLLMSVFENS 312

  Fly   338 FDRKGYTDEGEFDWTGKTMSTPVGSLQTGHEVIIS---PNKDRHNVTAKTNAKGGVAAWPDVPKP 399
            ...:..|:...:||.           ::|.|.|||   |...:.| |..|.|..||.....:|  
Zfish   313 MKERIITENEPYDWE-----------KSGTETIISATTPTAAQQN-TRPTAAMVGVINVTPMP-- 363

  Fly   400 GATLGNLTPADRHGSVQVVSSTNGELNPDDPTAGHSNTPI--TQQP-EVEVVDETKCCCFFKRKK 461
                |:|...:....||....::.|..|..|    |..|:  :|.| :.:..:||.    |.|.|
Zfish   364 ----GDLPRENTDDVVQDEHLSDQENAPPIP----SGRPVDGSQMPTDADGWEETD----FNRNK 416

  Fly   462 ------KKSTRQKXLDGVQC--SPEREAVTLLRATSHSNSRDSVLNNPSQDYIQQA 509
                  |....:....|| |  ||:|..:.......|| .|...:|:|..|.:..|
Zfish   417 LRINLGKGGQEEDGSRGV-CPVSPQRGGLDSPGMQVHS-IRYRRVNSPESDRMSAA 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 101/301 (34%)
S_TKc 62..335 CDD:214567 97/281 (35%)
CK1gamma_C 354..428 CDD:289378 18/76 (24%)
ttbk1aXP_009304405.1 PKc_like 49..310 CDD:304357 97/282 (34%)
Pkinase 50..295 CDD:278497 91/266 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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