DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and csnk1g3

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_012813598.1 Gene:csnk1g3 / 100038034 XenbaseID:XB-GENE-479074 Length:456 Species:Xenopus tropicalis


Alignment Length:451 Identity:311/451 - (68%)
Similarity:353/451 - (78%) Gaps:26/451 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 ALAGGKSSSNNMYSTRQSVSTTTGVLMVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPM 95
            |...|:|..|    ||.:.|:.:||||||||||||||||||||||||||||||.||:||||:|||
 Frog    16 ARPSGRSGHN----TRGTGSSNSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPM 76

  Fly    96 KSKAPQLHLEYRFYKLLGSHADNAPDGIPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICARKFS 160
            ||:||||||||||||.|||     .||:|::|:.|.| |:||||||||||.||||||::|.|.||
 Frog    77 KSRAPQLHLEYRFYKQLGS-----GDGVPQVYYFGPC-GKYNAMVLELLGPSLEDLFDLCDRTFS 135

  Fly   161 LKTVLMIAKQLLHRIEYVHSRHLIYRDVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRH 225
            ||||||||.||:.|:|||||::|||||||||||||||...|.::|||||||||||||||.:|.:|
 Frog   136 LKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKNQQIIHIIDFGLAKEYIDPETKKH 200

  Fly   226 IPYREHKSLTGTARYMSINTHMGREQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIG 290
            |||||||||||||||||||||:|:|||||||||||||||||||||||||||||||||||||||||
 Frog   201 IPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIG 265

  Fly   291 DTKRATPIEVLCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDWTGKT 355
            ||||||||||||:..|||.||||||||||||||.||||:||:||.||||||||..:.|:||.||.
 Frog   266 DTKRATPIEVLCENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWIGKQ 330

  Fly   356 MSTPVGSLQTGHEVIISPNKDRHN-----VTAKTNAKGGVAAWPDVPKPGATLGNLTPADRH-GS 414
            :.||||.:..  :..:|.|::.|.     ..||..:....|||.........|.....|||| ||
 Frog   331 LPTPVGPIHA--DPALSSNREAHQHRDKMQQAKNQSADHRAAWDSQQANPHHLRAHLAADRHGGS 393

  Fly   415 VQVVSSTNGELNPDDPTAGHSNTPITQQPEVEVVDETK--------CCCFFKRKKKKSTRQ 467
            ||||||||||||.|||||||||.|||...||||:|||.        |||||||:|:|:.::
 Frog   394 VQVVSSTNGELNTDDPTAGHSNAPITAPAEVEVLDETNCQKVLNMWCCCFFKRRKRKTIQR 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 236/292 (81%)
S_TKc 62..335 CDD:214567 223/272 (82%)
CK1gamma_C 354..428 CDD:289378 32/79 (41%)
csnk1g3XP_012813598.1 STKc_CK1_gamma 42..329 CDD:271028 236/292 (81%)
CK1gamma_C 329..407 CDD:372217 32/79 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H121650
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D281034at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R203
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.040

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