DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gish and ttbk1b

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_017207296.1 Gene:ttbk1b / 100000353 ZFINID:ZDB-GENE-100609-5 Length:1219 Species:Danio rerio


Alignment Length:524 Identity:146/524 - (27%)
Similarity:216/524 - (41%) Gaps:89/524 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GKSSSNNMYSTRQSVSTTTGVLMVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKA 99
            |.....||....:.|.......:|...::|.||||.|.|||:....:|...|:||:|:|..:...
Zfish     7 GVHGDENMNGAGEQVDILPSNCLVKDRWKVLKKIGGGGFGEIYEAYDLLTRENVALKVESAQQPK 71

  Fly   100 PQLHLEYRFYKLLGSHADNAPDGIPRIYHLGTCG--GRYNAMVLELLGLSLEDLFNICAR-KFSL 161
            ..|.:|....|.|        .|...:.....||  .::|.:|::|.|.:|.||.....| .||:
Zfish    72 QVLKMEVAVLKKL--------QGKNHVCKFIGCGRNDKFNYVVMQLQGRNLADLRRSQPRGTFSM 128

  Fly   162 KTVLMIAKQLLHRIEYVHSRHLIYRDVKPENFLIGR-TSTKREKIIHIIDFGLAKEYIDLDTNRH 225
            .|.|.:.||:|..||.:||...::||:||.||.:|| .||.|:  .:::|||||::|  .:||..
Zfish   129 STTLRLGKQILESIEAIHSVGFLHRDIKPSNFAMGRLPSTCRK--CYMLDFGLARQY--TNTNGE 189

  Fly   226 I-PYREHKSLTGTARYMSINTHMGREQSRRDDLEALGHMFMYFLRGSLPWQGLK----ADTLKER 285
            : |.|......||.||.|||.|..:|..|.|||.:|.:|.:.|..|.|||:.:|    ...:|||
Zfish   190 VRPPRSVAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFTVGQLPWRKIKDKEQVGQIKER 254

  Fly   286 YQKIGDTKRATPIEVLCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFD 350
            |:.          .:|....|.||..:..:|..||:|..|||..|..:|::....:..|:...:|
Zfish   255 YEH----------RMLLKHMPAEFHIFYDHVLDLDYFTKPDYQLLMSVFENSMKDRVITENEPYD 309

  Fly   351 W--TGKTMSTPVGSLQTGHEVIISPNKDRHNVTAKTNAKGGVAAWPDVPKPGATLGNLTPADRHG 413
            |  :|...:.|.           |.:......|.:|.|..||.....||      |.|...:...
Zfish   310 WEKSGTDTALPT-----------STHTPPQQNTRQTAAIVGVVNVTPVP------GELPRENTDD 357

  Fly   414 SVQVVSSTNGELNPDDPTAGHSNTPITQQPEVEVVDETKCCCFFKRKKKK----STRQKXLDG-- 472
            .:|....::.|..|........:.|....|..|..|||.    |.|.:.:    .|:....||  
Zfish   358 VLQDEHLSDQENAPPALIPSRPSEPAPAAPAGEAWDETD----FNRNQLRISISKTQVAAEDGDE 418

  Fly   473 -----------------VQCSPER-------EAVTLLRATSHSN-----SRDSVLNNPSQDYIQQ 508
                             .|..|.|       |:..|..|....:     ||..:|.:||:.....
Zfish   419 PAGGGRSVSPARGGEGDAQARPPRYRRVNSPESERLSGAEDRGDGADKRSRLDMLGSPSRHVYSS 483

  Fly   509 ATSQ 512
            ..:|
Zfish   484 QPAQ 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 103/303 (34%)
S_TKc 62..335 CDD:214567 99/281 (35%)
CK1gamma_C 354..428 CDD:289378 13/73 (18%)
ttbk1bXP_017207296.1 STKc_TTBK1 33..294 CDD:271032 99/282 (35%)
SPS1 34..393 CDD:223589 121/397 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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