DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment src and Src42A

DIOPT Version :9

Sequence 1:XP_017953215.1 Gene:src / 496893 XenbaseID:XB-GENE-489820 Length:544 Species:Xenopus tropicalis
Sequence 2:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster


Alignment Length:565 Identity:262/565 - (46%)
Similarity:332/565 - (58%) Gaps:87/565 - (15%)


- Green bases have known domain annotations that are detailed below.


 Frog    10 KPREGGPRSRSLDIAEGSHQPFTSLSASQTP---SKSLD---------SHRQPAQPFGGNCDL-- 60
            :||....:.|.|.    .||        |||   ..|||         :.|||.:.:.....|  
  Fly  1080 RPRRSLKQHRCLQ----QHQ--------QTPLAKKHSLDNCLQVVSSTTSRQPLRRWSNQTPLKC 1132

 Frog    61 --------TPFGGVNFSDTITSPQRIGPLAGGVTTFVALYDYESRT-----ETDL-SFKKGERLQ 111
                    .|...:..|.::  |.............:::.|....|     :|.| :.|||:..:
  Fly  1133 TCHPATEELPLTAIEKSRSL--PAACSASCSHTCAHLSVIDQSPATTKCFGKTSLTTAKKGKSRR 1195

 Frog   112 IVNNTRPDMREGDWWLARSLSSGQTGYIPSNYVAPSDSIQAEEWYLGKITRREAERLLLSLENPR 176
            :...||                             .:.:..:.||..||.|.|||:.||..||..
  Fly  1196 LSEFTR-----------------------------GEFLNEKSWYFRKIKRIEAEKKLLLPENEH 1231

 Frog   177 GTFLVRESETTKGAYCLSVSDYDANRGLNVKHYKIRKLDSGGFYITSRTQFSSLQQLVAYYSKHA 241
            |.||:|:||:....|.|||.|.|     .||||:||:||.|||:|..||.|.:||:||.:|||.:
  Fly  1232 GAFLIRDSESRHNDYSLSVRDGD-----TVKHYRIRQLDEGGFFIARRTTFRTLQELVEHYSKDS 1291

 Frog   242 DGLCHRLTTVC-PTAKPQTQGLS---KDAWEIPRDSLRLELKLGQGCFGEVWMGVSVGTWNGTTR 302
            ||||..|...| ...||.|:|||   :|.|||.|.||:...|||.|.||:||.|:    ||.||.
  Fly  1292 DGLCVNLCKPCVQIEKPVTEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGL----WNNTTP 1352

 Frog   303 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK--GE 364
            |||||||.|||.|:.||.|||:||||||.||:|||||.: ||||||:||.|..||||::|:  ..
  Fly  1353 VAIKTLKSGTMDPKDFLAEAQIMKKLRHTKLIQLYAVCTVEEPIYIITELMKHGSLLEYLQAIAG 1417

 Frog   365 MGRYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 429
            .||.|::..|:|||||||:||||:|..||:||||.|.|:|||:..:.|:|||||||||:::||.|
  Fly  1418 KGRSLKMQTLIDMAAQIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLARLIKEDEYEA 1482

 Frog   430 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 494
            |.||:|||||||||||.|.:|:|||||||||||||||.|.||:|||||.|.|||.|||.|||||.
  Fly  1483 RVGARFPIKWTAPEAANYSKFSIKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQ 1547

 Frog   495 PPDCPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTATEPQYQ 539
            ||:|...|:::|.:||.|||..|||||.||..|||::|:.:..|:
  Fly  1548 PPNCEPRLYEIMLECWHKDPMRRPTFETLQWKLEDFYTSDQSDYK 1592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
srcXP_017953215.1 None
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 51/95 (54%)
PTKc_Frk_like 1319..1587 CDD:270653 175/271 (65%)
Pkinase_Tyr 1328..1580 CDD:285015 165/255 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 76 1.000 Domainoid score I8785
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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