DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment OGDH and kgd1

DIOPT Version :10

Sequence 1:NP_001425936.1 Gene:OGDH / 4967 HGNCID:8124 Length:1038 Species:Homo sapiens
Sequence 2:NP_595772.1 Gene:kgd1 / 2540991 PomBaseID:SPBC3H7.03C Length:1009 Species:Schizosaccharomyces pombe


Alignment Length:1038 Identity:474/1038 - (45%)
Similarity:653/1038 - (62%) Gaps:55/1038 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     8 AAKLRPLTASQTVKTFSQNRPAAARTFQQIRCYSAPVAAEPFLSGTSSNYVEEMYCAWLENPKSV 72
            :||.|.|..| .|..:..||.....:.||.|.: |....:.||:|.:::||:|||.||.::|.||
pombe     8 SAKARALRRS-AVTAYRLNRLTCLSSLQQNRTF-ATQPTDDFLTGGAADYVDEMYDAWKKDPNSV 70

Human    73 HKSWDIFFRNT-NAGAPPGTAYQSPLPLSRGSLAAVAHAQSLVEAQPNVDKLVEDHLAVQSLIRA 136
            |.||..:|:|. ..|..|..|:|:| ||...:.:..|...||:......|..|..::.||.|:||
pombe    71 HASWQAYFKNVQERGVSPSKAFQAP-PLLDYADSYTALDSSLINGNNYADIDVGIYMKVQLLVRA 134

Human   137 YQIRGHHVAQLDPLGILDADLDSSVPADIISSTDKLDLAVFKERLRMLTVGGFYGLDESDLDKVF 201
            ||.||||:|:||||||   :::.:.|:::...                    .||..||||::..
pombe   135 YQSRGHHLAKLDPLGI---NVNHNRPSELTLE--------------------HYGFTESDLNRTI 176

Human   202 HLP---TTTFIGGQESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPGIMQFTN 263
            ||.   ...|.......:.||||:...|..||....|||..|:..::..||....|||...::::
pombe   177 HLGPGILPNFREAGRKTMTLREIVETCEKIYCGSFAVEFTHISSRKRSNWILSHLETPTPFRYSH 241

Human   264 EEKRTLLARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRG 328
            ::|..:..||..:..||.||..|:.::|||||||||.::|.:|.:||:|.:.|:..:::||.|||
pombe   242 DQKIMIFDRLSWADSFERFLFTKFPNDKRFGLEGCEAMVPGMKALIDRSVDEGISNIVIGMAHRG 306

Human   329 RLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVANPSHLE 393
            |||:|.|::||..:.||.:|....:..|||||||||||||.::| ...:.:.::|||||||||||
pombe   307 RLNLLHNIVRKPAQAIFSEFRGTQDPDDEGSGDVKYHLGMNYQR-PTPSGKRVSLSLVANPSHLE 370

Human   394 AADPVVMGKTKAEQFYCGD-TEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVV 457
            |.||||:||.:|.|.|..| ...::.|.||:|||||||.||:|||||.|..||.|:|.||||:|:
pombe   371 AEDPVVLGKVRAIQHYTSDEASHEQSMGILIHGDAAFAAQGVVYETFGLHALPGYSTGGTVHIVI 435

Human   458 NNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVC 522
            |||||||||||.|||:||.||:|:.:.|||||||.||.|||.::|::||:||..|..|||||:||
pombe   436 NNQIGFTTDPRFARSTPYCTDIAKSMEAPIFHVNGDDVEAVTFICQLAADWRKAFKTDVVVDIVC 500

Human   523 YRRNGHNEMDEPMFTQPLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFAR 587
            |||:||||.|:|.||||.|||.|.|..|..:.|.:.|:.:..|::.|.:.:..:...|.|.:|..
pombe   501 YRRHGHNETDQPSFTQPRMYKAIAKHPPTFKIYTQQLLQEKTVSKAEVDAQEKRVWDILESSFES 565

Human   588 SKDEKILHIKHWLDSPWPGFFTLDGQPRSMS---CPS--TGLTEDILTHIGNVASSVPVENFTIH 647
            ||:.|..| :.||.:||.||    ..|:.:.   .||  ||:..|.|..||....::| |.|..|
pombe   566 SKNYKSDH-REWLSNPWVGF----ASPKDLMTKILPSYPTGVNIDTLKQIGKALYTLP-EGFDAH 624

Human   648 GGLSRILKTRGEMVKN-RTVDWALAEYMAFGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDQNVD 711
            ..|.|||..|.:.:.: ..:|...||.:|||:||:||.|:|:|||||||||||.||.|||||: .
pombe   625 RNLKRILNNRNKSISSGEGIDMPTAEALAFGTLLEEGHHVRVSGQDVERGTFSQRHAVLHDQS-S 688

Human   712 KRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQF 776
            :...||:|||.||||.:.:.|||||||||||||.|::::||||||:||||||||.|.||||||||
pombe   689 ENVYIPLNHLSPNQASFVIRNSSLSEYGVLGFEYGYSLSSPNALVVWEAQFGDFANNAQCIIDQF 753

Human   777 ICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDPDVLPDLKEANFDINQLYDCN 841
            |..|:.||:::.||||.||||.:|.||||||||.||:||:||:||...|..::..   .|..|||
pombe   754 IAAGETKWLQRTGIVLSLPHGYDGQGPEHSSARMERYLQLCNEDPREFPSEEKLQ---RQHQDCN 815

Human   842 WVVVNCSTPGNFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGTHFQRVIPED--G 904
            ...:..:.|..:||.|||.|...|||||:||..|||||||.|||:.||......|:.::.|:  |
pombe   816 IQAIYVTKPSQYFHALRRNIHRQFRKPLVIFFSKSLLRHPAARSTIDEFDEKHGFKLILEEEEHG 880

Human   905 PAAQNPENVKRLLFCTGKVYYDLTRERKARDMVGQVAITRIEQLSPFPFDLLLKEVQKYPN-AEL 968
            .:...||.:::|:.|:|:|:..|::.|: .:.:..:||||:|||.||.:..:...:.:||| .|:
pombe   881 KSILPPEKIEKLIICSGQVWVALSKARE-ENKIDNIAITRVEQLHPFGWKQMAANISQYPNLKEI 944

Human   969 AWCQEEHKNQGYYDYVKPRLRTT---ISRAKPVWYAGRDPAAAPATGNKKTHLTELQRLLDTA 1028
            .|||||..|.|.:.|::||:.|.   :.|..||.||||.|:|:.|.|||:.||.|.::.|:.|
pombe   945 IWCQEEPLNAGAWTYMEPRIYTILKHLGRDLPVRYAGRPPSASVAAGNKQQHLAEQEQFLNDA 1007

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OGDHNP_001425936.1 None
kgd1NP_595772.1 SucA 47..1008 CDD:440333 462/997 (46%)

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