DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drm and sob

DIOPT Version :10

Sequence 1:NP_001285590.1 Gene:drm / 49638 FlyBaseID:FBgn0024244 Length:88 Species:Drosophila melanogaster
Sequence 2:NP_476882.1 Gene:sob / 33581 FlyBaseID:FBgn0004892 Length:578 Species:Drosophila melanogaster


Alignment Length:71 Identity:37/71 - (52%)
Similarity:50/71 - (70%) Gaps:8/71 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RPKCEFICKYCQRRFTKPYNLMIHERTHKSPEITYSCEVCGKYFKQRDNLRQHRNLHMD------ 79
            |.|.:||||:|.|:|||.|||:|||||| :.|..|||::|||.|:::|:||.||.:|..      
  Fly   390 RSKKQFICKFCNRQFTKSYNLLIHERTH-TDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKC 453

  Fly    80 -TCGRG 84
             .||:|
  Fly   454 AECGKG 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drmNP_001285590.1 C2H2 Zn finger 28..48 CDD:275368 14/19 (74%)
C2H2 Zn finger 57..77 CDD:275368 10/19 (53%)
sobNP_476882.1 COG5048 <389..529 CDD:227381 37/71 (52%)
C2H2 Zn finger 397..417 CDD:275368 14/19 (74%)
zf-H2C2_2 409..434 CDD:463886 16/25 (64%)
C2H2 Zn finger 425..445 CDD:275368 10/19 (53%)
zf-H2C2_2 437..460 CDD:463886 8/23 (35%)
C2H2 Zn finger 453..473 CDD:275368 3/7 (43%)
C2H2 Zn finger 481..501 CDD:275368
C2H2 Zn finger 509..529 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.