DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrg and PAPOLG

DIOPT Version :10

Sequence 1:NP_001261097.1 Gene:hrg / 49636 FlyBaseID:FBgn0015949 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_075045.2 Gene:PAPOLG / 64895 HGNCID:14982 Length:736 Species:Homo sapiens


Alignment Length:680 Identity:344/680 - (50%)
Similarity:440/680 - (64%) Gaps:91/680 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLVKQWVKEISVS 90
            |..|:||.||||.|:..|...|.:|..:::|:.|||.::|||||:.:|.|||.|||:|:.::|.|
Human    17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSES 81

  Fly    91 KNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERTDYFQSFFEVLKKQPEVTECR 155
            ||:|.|....:||||:||||||||||.|||||||||||||::||:|:||||||.||.|..:...|
Human    82 KNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKHQDGIRNLR 146

  Fly   156 SVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILA 220
            :||:|||||||..||||||||:||||:::.|.|:.|||||:.||:||.|.:|||||||||||||.
Human   147 AVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILH 211

  Fly   221 LVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFS 285
            ||||.|.|||.||.:|||||:.|||||.||:.|||:|||||||||||||||||:|||||||||||
Human   212 LVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFS 276

  Fly   286 RWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFN 350
            :|:||||||||.|:..||...|||||||.||||||||||||||||||||:|||.||:.|::.||.
Human   277 KWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFK 341

  Fly   351 RGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLER 415
            :|:.:||||:.|:..|.:|.|.|:||.:|||:|||..::.|.::||||.||||||:|:|:|||||
Human   342 QGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLER 406

  Fly   416 NPHIALAHVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFERSEN 480
            |..|.||||||:.|   .|...::..||                     :.||||:|:.|.|.||
Human   407 NEFITLAHVNPQSF---PGNKEHHKDNN---------------------YVSMWFLGIIFRRVEN 447

  Fly   481 ---LNVDLTESIQNFTEHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKSMESHN 542
               :|:|||..||:||:.|.....||.||||||.|:|.|||:|||..||.::.|::::|...|. 
Human   448 AESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSD- 511

  Fly   543 NFNNTLLANRKRLSTELAQSQDPLPPGQQPSSGNRGRDSGAKIQRLSDSLTEENSNASSDMGAGT 607
                   .||                    |||      |.:.:||  ||.....::|.|...||
Human   512 -------VNR--------------------SSG------GLQSKRL--SLDSSCLDSSRDTDNGT 541

  Fly   608 PTTPTTAQLSAPSFKSSGKNGSE--IDVVEQEPTQPHNNG------NASSNTTTTEVACSXQPPT 664
            |.....::..:||...:.:|.:|  ..:||:..:.|...|      .|..::|...|:    |||
Human   542 PFNSPASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVS----PPT 602

  Fly   665 LHPHP-------------PHQQPPPAPPQP 681
            :...|             ||.   ||..||
Human   603 VCTIPTVVGRNVIPRITTPHN---PAQGQP 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrgNP_001261097.1 PAP_central 29..371 CDD:461486 228/341 (67%)
PAP_RNA-bind 374..534 CDD:461484 75/162 (46%)
PAPOLGNP_075045.2 PAP_central 20..363 CDD:461486 228/342 (67%)
PAP_RNA-bind 366..503 CDD:461484 75/160 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 506..564 20/93 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 673..720
Blue background indicates that the domain is not in the aligned region.

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