DRSC/TRiP Functional Genomics Resources

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Protein Alignment ODC1 and Odc1

DIOPT Version :9

Sequence 1:NP_001274118.1 Gene:ODC1 / 4953 HGNCID:8109 Length:461 Species:Homo sapiens
Sequence 2:NP_477052.2 Gene:Odc1 / 35766 FlyBaseID:FBgn0013307 Length:394 Species:Drosophila melanogaster


Alignment Length:392 Identity:178/392 - (45%)
Similarity:241/392 - (61%) Gaps:37/392 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    24 LDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFD 88
            |||.:|            :.||..:.:|...|.|.|||:.|||||||||...:|:.||..|.|||
  Fly    29 LDQALN------------ICDLSSVERKLRLWQKLLPRIKPFYAVKCNDDPMVVRLLAQLGAGFD 81

Human    89 CASKTEIQLVQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVL 153
            ||||.|::||....|.|||||:||||:.||.::||..:.|...|.|:|.|:.|:...:|.:.|::
  Fly    82 CASKNEVKLVLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPNSNLIV 146

Human   154 RIATDDSKAVCRLSVKFG--ATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDAR 216
            |..::..:|.|.|..|||  |.:..:.|:| .||.|.:.|.|.||||||||::.:.:.:||..|:
  Fly   147 RFKSEAKEAQCPLGDKFGCDADVDAAALML-LAKSLELKVTGTSFHVGSGCSELQAYDRAIKKAK 210

Human   217 CVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGRYYVA 281
            .:|..||.:|:.|..||||||||||:||  |||:|...:|.::.::|| |..|.|||||||::||
  Fly   211 NLFKFGALLGYDMDFLDIGGGFPGSDDV--KFEKIAESVNTSVQRHFP-DERVHIIAEPGRFFVA 272

Human   282 SAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDH-----AHVKPLLQ 341
            :|.||...|.||: .::.:.|..|       |.|||:|||||||||||||||     .|.....:
  Fly   273 AACTLVCKIHAKR-EIRNEAGKLD-------TVMYYLNDGVYGSFNCILYDHQVVIAEHYLDNAE 329

Human   342 KRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTFNGFQRP-TI 405
            ..|     :..|.||||:||.||:|.|...||.::.||.:.|.||||||:..||.||||:.| |:
  Fly   330 SLP-----HLKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPIASAFNGFEVPKTL 389

Human   406 YY 407
            |:
  Fly   390 YF 391

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
ODC1NP_001274118.1 PLPDE_III_ODC 37..408 CDD:143482 174/379 (46%)
Pyridoxal phosphate binding. /evidence=ECO:0000269|PubMed:17407445, ECO:0000269|PubMed:26305948, ECO:0000269|PubMed:26443277, ECO:0007744|PDB:2OO0 274..277 2/2 (100%)