Protein Alignment fs(2)ltoPP43 and RDM4

DIOPT Version :10

• Sequence 1: NP_524940.1
• Gene: fs(2)ltoPP43 / 49505
• FlyBaseID: FBgn0004811
• Length: 367
• Species: Drosophila melanogaster
• Sequence 2: NP_180587.2
• Gene: RDM4 / 817578
• AraportID: AT2G30280
• Length: 346
• Species: Arabidopsis thaliana
• Alignment Length: 370
• Identity: 92/370 - (24%)
• Similarity: 157/370 - (42%)
• Gaps: 87/370 - (23%)

  Fly     2 PAVVRIKRRIDEEPQTAFVLN-----GKRRRLHNDENALEDAGAVAGAVAGAVASDK-------- 53
            |.:||:||::.:....||.|.     .||..|...:.::.|:|....:||..|...|
plant    17 PVIVRVKRKVGQSLLDAFWLEINERPLKRPTLDFSKLSISDSGERGPSVAEDVKPKKVLVRHLET 81

  Fly    54 --DELTT---VLKFAGTLEKQDDCATRKFAAARLNKAAARDLVQQQRSNDAAIASALRRDRQRQE 113
              |..||   :..|..:...:..|:..||...::  |..:|..::||         |.:..|:|:
plant    82 VTDSETTADIIHSFFESDHNEKSCSKGKFEERKI--AFKKDNRKEQR---------LTKSVQKQQ 135

  Fly   114 -AQENSREQRFRVVNCLRSTLENSAAEAECPESQSHESSSHITIVDIESQQQQHMGTASAAAEEQ 177
             |.||:|.::.     .||...|        :...||......::.:::::::.......:.|:|
plant   136 IASENARFEQI-----WRSRKGN--------KEGIHEKCHFFDVIRVDTEERRDNAQEFTSLEDQ 187

  Fly   178 QQ--------QEIAPSQDQQQPADSDVG----YVYDLYVPENEMQAAYVDMMDDNYLSVIPVGEI 230
            :.        :|..|:..::..||....    ||||.|....||     |:.:|:..:..|:  :
plant   188 KMLASFLPLLRECIPTAAEEIEADIQSSHTEEYVYDYYAVNEEM-----DISEDSSKNQFPL--V 245

  Fly   231 VLED----CYNDQDEDYDSEDSNQENYFTNDYPDDDEAGAMGSDDELCRQMNKFMLDDDEDEF-- 289
            ::||    |....:.||||||||.|::...|||:::|......||           |||:||.
plant   246 IVEDEEEFCDGSDESDYDSEDSNAEDHPKTDYPEEEEEEEEEDDD-----------DDDDDESEE 299

  Fly   290 ----ASTSDDDDYATFRDPYVHTI--DTEEDSFVDDVDFYNVDRE 328
                ||...||:..:.|  :|.::  |.|.|.:.:||..|:...|
plant   300 EKSEASDESDDEETSKR--HVRSVLGDDEFDDYAEDVYGYSESDE 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fs(2)ltoPP43	NP_524940.1	Iwr1	198..262	CDD:430085	25/67 (37%)
RDM4	NP_180587.2	Iwr1	218..278	CDD:430085	23/66 (35%)