DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fs(2)ltoPP43 and Slc7a6os

DIOPT Version :9

Sequence 1:NP_524940.1 Gene:fs(2)ltoPP43 / 49505 FlyBaseID:FBgn0004811 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_647544.2 Gene:Slc7a6os / 246187 RGDID:708394 Length:305 Species:Rattus norvegicus


Alignment Length:337 Identity:88/337 - (26%)
Similarity:146/337 - (43%) Gaps:85/337 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AVVRIKRRIDEEPQTAFVLNGKRRRLHNDENALEDA--GAVAGAVAGAVASDKDELTTVLKFAGT 65
            ||:|:||:.:.||..|.||..||.|....|::..:.  |...||.           ..|.:...|
  Rat     7 AVLRVKRKRNAEPAEALVLACKRLRSGEVESSAPETPEGQETGAE-----------RNVFQLVAT 60

  Fly    66 LEKQDDCATRKFAAARLNKAAARDLVQQQRSNDAAIASALRRDRQRQEAQENSREQRFRVVNCLR 130
            :..|::      ...:|.:||.|    ..||:...|    ||| .|...:|..:|.|:|||:..|
  Rat    61 VRSQEE------PIQQLVRAALR----PSRSSQLRI----RRD-LRASVREVRKEGRYRVVSSHR 110

  Fly   131 STLENSAAEAECPESQSHESSSHITIVDIESQQQQHMGTASAAAE------------EQQQQEIA 183
            |:..:::.|.:|......:..  ..::|:..:::.....|:...:            |..::.:.
  Rat   111 SSGTSNSLEPQCVSEAVRDGG--FQLLDLVHEEEDPEAAATDCRKTSDPDVILCNSVELIRERLT 173

  Fly   184 PSQD------QQQPADSDVGYVYDLYVPENEMQAAYVDMMD----DNYLSVIPVG---EIVLEDC 235
            .|:|      |::|..|| .||||:|         |::|..    :|.|||.|..   |:|.:| 
  Rat   174 VSEDGSQVEHQEEPKHSD-DYVYDIY---------YMEMAPPGWIENILSVQPYSQEWELVNDD- 227

  Fly   236 YNDQDEDY--DSEDSNQENYFTNDYPDD------------DEAGAMGSDDELCRQM--NKFMLDD 284
              :|.||.  |.:|.|.||.:.|:|||:            ||..::..::..||::  :|:.| |
  Rat   228 --EQPEDIYEDEDDENSENNWRNEYPDEESSDRDEDSRGSDEYNSLSDEERSCRRLVWSKYPL-D 289

  Fly   285 DEDEFASTSDDD 296
            .:.||...|..|
  Rat   290 VQKEFGYDSPHD 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(2)ltoPP43NP_524940.1 DUF1762 194..262 CDD:285743 29/88 (33%)
Slc7a6osNP_647544.2 DUF1762 190..254 CDD:285743 29/76 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4852
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 67 1.000 Inparanoid score I5251
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1160014at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_106713
Panther 1 1.100 - - LDO PTHR31196
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6315
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.830

Return to query results.
Submit another query.