DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Bb and Dmgdh

DIOPT Version :9

Sequence 1:NP_536791.1 Gene:l(2)37Bb / 49427 FlyBaseID:FBgn0002021 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_083048.1 Gene:Dmgdh / 74129 MGIID:1921379 Length:869 Species:Mus musculus


Alignment Length:511 Identity:110/511 - (21%)
Similarity:198/511 - (38%) Gaps:109/511 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LRLLGNDMRKVKEFFVPKEPETEKVPIPTQSQFHFSGERDKSKEATVPDDFQTHCDVLIIGGGGV 108
            |||.|..:|.     .|:.|.:             :|.|:..:....|.:::...:.:|||||.|
Mouse     7 LRLRGLALRG-----SPRRPSS-------------AGLREGQESPASPPEWKDRAETVIIGGGCV 53

  Fly   109 GSSIAYWLKEKARDGL-NVVVVEKDDTYAQSATRVSVGGLCQQFSLPENIQMSLF-AADFLRSAR 171
            |.|:||.|   |:.|: :||::||.:..|.|....:  ||...|....|::...: :........
Mouse    54 GVSLAYHL---AKAGMRDVVLMEKSELTAGSTWHAA--GLTTYFHPGINLKKIHYDSIKLYERLE 113

  Fly   172 KHFGEEVPLQFTPHGHLMLAGEE-HAESLKRSSQLQNELGARNELLTADRLTARFPWLNTKGIAL 235
            :..|:.|  .|...|.:.||... ..:..|......|.......::..:::...||.||...|..
Mouse   114 EETGQVV--GFHQPGSIRLATTPVRVDEFKYQMTRTNWHATEQYIIEPEKIHELFPLLNMNKILA 176

  Fly   236 GCLGLEKEGWFNPLALLSNFRRSASGYGAHFISGQVVDFEFKSQTDISVVTDLGSN-EGAYTGLE 299
            | |....:|..:|.:|.......|..|||      ::.:.       :.||.|... :|.:.   
Mouse   177 G-LYNPGDGHIDPYSLTMALAAGARKYGA------LLKYP-------APVTSLKPRPDGTWD--- 224

  Fly   300 KAVIQLPDGTRRTCKFALCVISAGASSEQIARLARIGVGPGILRVPLPINARKRYMYAINSQAQS 364
               ::.|.|:.|..:.   |.:||..:.::.::  ||:...::.|        ::.|.:.|....
Mouse   225 ---VETPQGSVRANRI---VNAAGFWAREVGKM--IGLDHPLIPV--------QHQYVVTSTIPE 273

  Fly   365 APGM--NMPMTIDPSGIFI---RRDG-LGGNYICVQDSTEEYNSAMIDPQYFAQHIRP------- 416
            ...:  .:|:..|..|.:.   .||| |.|.|       |......:...:....:.|       
Mouse   274 VKALKRELPVLRDLEGSYYLRQERDGLLFGPY-------ESQEKMKLQASWVTHGVPPGFGKELF 331

  Fly   417 ---------HL---YNRIPVLGEAQVVDSWAG--CYDHNVYDENGILGAHPYYNNLYLATGFSGH 467
                     ||   ...||||.:|.:::...|  .|..::..   ::|.|....|.::|||| |:
Mouse   332 ESDLDRISDHLEAAMEMIPVLKKADIINVVNGPITYSPDILP---MVGPHQGVRNYWVATGF-GY 392

  Fly   468 GVQQSLAVGRAISELIMDGQ--FRTIDLSRLSFDRLIVDQ-------PMFELNNVL 514
            |:..:..||:.:|:.|:.|:  |..|:|....:.:....|       ..:..||::
Mouse   393 GIIHAGGVGKFLSDWILHGEPPFDLIELDPNRYGKWTTTQYTEAKARESYGFNNIV 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37BbNP_536791.1 DadA 113..501 CDD:223737 89/420 (21%)
DmgdhNP_083048.1 NADB_Rossmann 38..>83 CDD:304358 19/47 (40%)
DadA 40..428 CDD:223737 97/438 (22%)
FAO_M 410..465 CDD:292961 7/39 (18%)
GCV_T 475..738 CDD:279857
GcvT 481..850 CDD:223481
GCV_T_C 746..838 CDD:285832
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D752680at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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