DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Bb and pdpr-1

DIOPT Version :9

Sequence 1:NP_536791.1 Gene:l(2)37Bb / 49427 FlyBaseID:FBgn0002021 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_492730.2 Gene:pdpr-1 / 172922 WormBaseID:WBGene00013718 Length:855 Species:Caenorhabditis elegans


Alignment Length:472 Identity:107/472 - (22%)
Similarity:161/472 - (34%) Gaps:151/472 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 HCDVLIIGGGGVGSSIAYWLKEKARDGLNVVVVEKDDTYAQSATRVSVGGLC-----QQFSLPEN 156
            :.||::.|||..|:||||.|   |:.|..|.:||||......||.:|.|.:.     |..||...
 Worm    21 NADVVVCGGGISGTSIAYHL---AKRGKKVALVEKDSIGCSGATGLSAGLVSSPIFWQDTSLQAI 82

  Fly   157 IQMSLFAADFLRSARKHFGEEVPLQFTPHGHLMLAGEEHAESLKRSSQLQNELGARN-------- 213
            .|.||       ....|.......::...|...||           |.:.||:..|.        
 Worm    83 AQASL-------DLYSHLATTCKFRYIKCGRTYLA-----------SSMANEILLRRMYSRGVVH 129

  Fly   214 ----ELLTA-DRLTARFPWLNTKGIALGCLGLEKEGWFNPLALLSNFRRSASGYGA-HFISGQVV 272
                |||.. ..:..|:|:|.|:.:.|.....|... .:|:||..:....|..||| .:.|..|:
 Worm   130 NDKVELLDCQSEMLERWPFLQTEDVQLALFSPEDVA-LDPVALCQHLALIAKDYGALIYESNPVL 193

  Fly   273 DFEFKSQTDI-SVVTDLGSNE--------GAYTG--LEKAV-------------------IQLPD 307
            :.....:..: .|.|.:|..|        |.:.|  |.||:                   .:||.
 Worm   194 EVHIGDEKQVYGVSTKMGFIETSHFVDAAGIWAGSHLVKALPHQHVQTAAYPCTYSYIHTSKLPT 258

  Fly   308 GT----------------RRTCKF-ALCVISAGASSEQIARLARIGVGPGILRVPLPINARKRYM 355
            |:                .||..| .||   ||.:.|.|..|||                     
 Worm   259 GSVSDMTPIFNDLDGNVMLRTTSFKTLC---AGFAEESIRPLAR--------------------- 299

  Fly   356 YAINSQAQSAPGMNMPMTIDPSGIFIRRDGLGGNYICVQDSTEEYNSAMIDPQYFAQHIRPHLYN 420
                 |..||.....|   :|                      ::|:  .||..      ..|.:
 Worm   300 -----QTGSATPWQHP---EP----------------------DWNT--FDPNL------EKLIS 326

  Fly   421 RIPVLGEAQVVDSWAGCYDHNVYDENGILGAHPYYNNLYLATGFSGHGVQQSLAVGRAISELIMD 485
            |.|:||:....|...|...:.. |:...:|........::..|.:|.|:..:..:|:.:.||:.:
 Worm   327 RCPMLGDCNHGDLIVGMEAYTP-DKLPTIGESSQAKGYWVMCGMNGQGLSLAGGLGKILGELMCE 390

  Fly   486 GQFRTIDLSRLSFDRLI 502
            .|..|.|::|:...|.|
 Worm   391 SQSSTADVARVDVGRFI 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37BbNP_536791.1 DadA 113..501 CDD:223737 97/453 (21%)
pdpr-1NP_492730.2 DAO 23..387 CDD:279590 99/448 (22%)
NAD_binding_8 28..>54 CDD:290186 15/28 (54%)
FAO_M 394..445 CDD:292961 5/14 (36%)
GcvT 439..833 CDD:223481
GCV_T 449..724 CDD:279857
GCV_T_C 733..833 CDD:285832
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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