DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Bb and pdpr

DIOPT Version :9

Sequence 1:NP_536791.1 Gene:l(2)37Bb / 49427 FlyBaseID:FBgn0002021 Length:515 Species:Drosophila melanogaster
Sequence 2:XP_002665475.2 Gene:pdpr / 100330789 ZFINID:ZDB-GENE-161017-151 Length:885 Species:Danio rerio


Alignment Length:497 Identity:102/497 - (20%)
Similarity:170/497 - (34%) Gaps:140/497 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 GSGSSGGDKSGEDLHPIRRTLRLLGNDMRKVKEFFVPKEPETEKVPIPTQSQFHFSGERDKSKEA 88
            |.|:|||.        .:|.:|           ||..:.|.|    :|.:::             
Zfish    23 GGGASGGQ--------AQRGVR-----------FFSSEAPPT----LPARAR------------- 51

  Fly    89 TVPDDFQTHCDVLIIGGGGVGSSIAYWLKEKARDGLNVVVVEKDDTYAQSATRVSVGGLCQQFSL 153
                       |||.|||.||:|:||.|   |:.|...:::.:........||...|.:.....|
Zfish    52 -----------VLICGGGVVGTSVAYHL---AKLGWTEILLLEQGRLGAGTTRFCAGIVSVAKPL 102

  Fly   154 PENIQMSLFAADFLRSARKHFGEEVPLQFTPHGHLMLA-GEEHAESLKRSSQLQNELGARNELLT 217
            ....||:.:::......::..|  |...|...|.|.|| .::...||||.:.....||....::.
Zfish   103 SIESQMADYSSALYERLQQETG--VSTGFVRTGSLCLAQNQDRFLSLKRLASRLKALGVACSIIK 165

  Fly   218 ADRLTARFPWLNTKGIALGCLGLEKEGWFNPLALLSNFRRSASGYGAHFISGQVVDFEFKSQTDI 282
            ...::...|.:|...: :|.|.|..:...:|..:......:|:..|...       ||..|.|.:
Zfish   166 PKEVSKLHPLVNIHDL-VGALHLPGDAVVSPPDVNHAMAVAAAANGVQI-------FEHTSVTHV 222

  Fly   283 --------SVVTDLGSNEGAYTGLEKAVIQLPDGTRRTCKFALC----VISAGASSEQIARLARI 335
                    :|.||.||.|..|                   |..|    ....|.|||        
Zfish   223 LMKNGHVAAVETDRGSVECEY-------------------FVNCAGQWAYELGQSSE-------- 260

  Fly   336 GVGPGILRVPLPINARKRYMYAINSQAQSAPGMNMPMTIDPSGIFIRRDGLGG------------ 388
                  ::|.:|::..:.:.......::..|. :.|:.||..|....|...||            
Zfish   261 ------VKVSVPLHGCEHFYLLTKPLSEPLPS-DSPVVIDMDGRIYARSWHGGILSGGFEKNPKP 318

  Fly   389 ------NYICVQDSTEEYNSAMIDPQYFAQHIRP---HLYNRIPVLGEAQVVDSWAGCYDHNVYD 444
                  |.:.||:..|:::           |..|   .|..|:|.| ||..|.....|.:....|
Zfish   319 IFTEGRNQLEVQNMQEDWD-----------HFEPMLSALLRRMPAL-EACEVQQLVNCPESFTPD 371

  Fly   445 ENGILGAHPYYNNLYLATGFSGHGVQQSLAVGRAISELIMDG 486
            ...::|..|.....::..|.:..|:..:...|:.::|.:..|
Zfish   372 MRCLMGETPGAGGYFVLAGMNSSGLSFAGGAGKFLAEWMTHG 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37BbNP_536791.1 DadA 113..501 CDD:223737 81/408 (20%)
pdprXP_002665475.2 DadA 46..428 CDD:223737 91/451 (20%)
FAO_M 412..467 CDD:292961 1/2 (50%)
GcvT 460..863 CDD:223481
GCV_T 470..743 CDD:279857
GCV_T_C 755..857 CDD:285832
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586488
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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