DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Bb and dmgdh

DIOPT Version :9

Sequence 1:NP_536791.1 Gene:l(2)37Bb / 49427 FlyBaseID:FBgn0002021 Length:515 Species:Drosophila melanogaster
Sequence 2:XP_021324608.1 Gene:dmgdh / 100141496 ZFINID:ZDB-GENE-080227-8 Length:862 Species:Danio rerio


Alignment Length:443 Identity:99/443 - (22%)
Similarity:171/443 - (38%) Gaps:70/443 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 IPTQSQFHFSGERDKSKEATVPDDFQTHCDVLIIGGGGVGSSIAYWLKEKARDGLNVVVVEKDDT 134
            :|.:....|:.:..::....:....|...|.|:||||.||.|:||.|.:..:.  :||::||.:.
Zfish    20 VPRERARSFATDPREASAGVLARRLQDSADTLVIGGGCVGVSVAYHLAKAGQK--DVVLLEKSEL 82

  Fly   135 YAQSATRVSVGGLCQQFSLPENI-QMSLFAADFLRSARKHFGEEVPLQFTPHGHLMLAGEE-HAE 197
            .|.|....:  ||...:....|: ::..::...........|:.|  .|...|.:.||... ..:
Zfish    83 TAGSTWHAA--GLTTYYHPGINLKKIHYYSIKLFEQLEAETGQAV--GFHQPGSIRLASTPVRVD 143

  Fly   198 SLKRSSQLQNELGARNELLTADRLTARFPWLNTKGIALGCLGLEKEGWFNPLALLSNFRRSASGY 262
            .||..............|:..:|:...||.||...:..| |....:|..:|.:|.......|..|
Zfish   144 ELKYQMSRTRWHPTPQFLIEPERIQQLFPLLNMDKVLAG-LYNPGDGHIDPYSLTMALAAGARMY 207

  Fly   263 GAHFISGQVVDFEFKSQTDISVVTDLGSNE-GAYTGLEKAVIQLPDGTRRTCKFALCVISAGASS 326
            ||.....             :.||.|...| |.:.      :|.|.||.|..:.   |.:.|..:
Zfish   208 GAQIYCP-------------AAVTGLTPTEDGRWD------VQTPHGTIRANRI---VNATGFWA 250

  Fly   327 EQIARLARIGVGPGILRVPLPINARKRYMYAINSQAQSAPGM--NMPMTIDPSGIFI---RRDG- 385
            .::.::.      |.....:|::    :.|.:.........:  .:|:..|..|.:.   .||| 
Zfish   251 RELGQML------GFPHPTVPVH----HQYVVTGSVPEVQALQTELPVIRDLEGSYYLRQERDGL 305

  Fly   386 LGGNY-----ICVQDS-----------TEEYNSAMIDPQYFAQHIRPHLYNRIPVLGEAQVVDSW 434
            |.|.|     :.:|||           .|.:.|   |......|:...: ..:|||..|.:::..
Zfish   306 LFGPYEREEKMKLQDSWITDGVPAGFGKELFES---DLDRIMDHVEMAM-EMVPVLKNADIINIV 366

  Fly   435 AGCYDHNVYDENGILGAHPYYNNLYLATGFSGHGVQQSLAVGRAISELIMDGQ 487
            :|...:.. |...::|.|....|.:.|.|| |:|:..|..|||.:|:.|::|:
Zfish   367 SGPITYTP-DLLPMIGPHQGARNYWTAIGF-GYGIIHSGGVGRFLSDWIINGE 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37BbNP_536791.1 DadA 113..501 CDD:223737 87/400 (22%)
dmgdhXP_021324608.1 DadA 44..433 CDD:223737 97/419 (23%)
FAO_M 419..466 CDD:318549
GcvT 466..855 CDD:223481
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D752680at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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