DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)37Bb and foxred1

DIOPT Version :9

Sequence 1:NP_536791.1 Gene:l(2)37Bb / 49427 FlyBaseID:FBgn0002021 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001096513.1 Gene:foxred1 / 100125144 XenbaseID:XB-GENE-5896602 Length:499 Species:Xenopus tropicalis


Alignment Length:518 Identity:206/518 - (39%)
Similarity:305/518 - (58%) Gaps:53/518 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLQRRNFSAGATSNGSGSSGGDKSGEDLHPIRRTLRLLGNDMRKVKEFFVPKEPE-TEKVPIPTQ 73
            ||::|:|         |:|......:|.             |:::.:.||....: .:.:|....
 Frog    21 LLRQRSF---------GTSACALKQDDF-------------MKELDKNFVQFHKKLMDSLPTSDW 63

  Fly    74 SQFHFSGERDKSKEATVPDDFQTHCDVLIIGGGGVGSSIAYWLKEK--ARDGLNVVVVEKDDTYA 136
            |.|...|:        :|.:   ..||:|:|||.:|.|||||||:|  .|..|.|||||:|.||:
 Frog    64 SPFTPIGD--------LPPE---RVDVVIVGGGVMGWSIAYWLKQKENRRGALRVVVVERDPTYS 117

  Fly   137 QSATRVSVGGLCQQFSLPENIQMSLFAADFLRSARKHFG----EEVPLQFTPHGHLMLAGEEHAE 197
            :::|.:|.||:.||||.||||.||||:|.|||:..:|.|    :.:.:||.|.|:|.||.||.|.
 Frog   118 RASTVLSAGGIRQQFSRPENIHMSLFSAQFLRNINEHLGVVNEDHIDIQFNPSGYLFLASEEGAT 182

  Fly   198 SLKRSSQLQNELGARNELLTADRLTARFPWLNTKGIALGCLGLEKEGWFNPLALLSNFRRSASGY 262
            .::.:..:|.|.||:..||:..:|..:|||:||.|:||...|||.||||:|..||:.|||.|...
 Frog   183 VMEENYNVQRECGAQVTLLSPHQLKKKFPWVNTNGVALASYGLENEGWFDPWTLLNAFRRKALSM 247

  Fly   263 GAHFISGQVVDFEFKSQTDISVVTDLGSNEGAYTGLEKAVIQLPDGTR-RTCKFALCVISAGASS 326
            |.:...|:|.||   |.|...::|..| :...::.:....:.:|:... :..:.||.:.:|||.|
 Frog   248 GVYHCHGEVTDF---STTKREMMTADG-DPVTFSRIGHVTVLMPNSLESQNVECALVINAAGAWS 308

  Fly   327 EQIARLARIGVGP--GILRVPLPINARKRYMYAINSQAQSAPGMNMPMTIDPSGIFIRRDGLGGN 389
            ..:|.||.||:||  .:..|.||:..:|||::.::  ....||::.|:.||.||::.||:|||||
 Frog   309 SNVAELAGIGIGPSDSLESVKLPVEPKKRYIFVVH--CPDGPGLDCPLLIDSSGVYFRREGLGGN 371

  Fly   390 YICVQDSTEE----YNSAMIDPQYFAQHIRPHLYNRIPVLGEAQVVDSWAGCYDHNVYDENGILG 450
            ||..:..|||    .::..:|..:|.|.:.|.|.:|:|.....:|..:|||.||:|.||:||::|
 Frog   372 YIAGKSPTEEEEPDISNMEVDYDFFQQKVWPLLAHRVPAFESLKVKTAWAGYYDYNTYDQNGVVG 436

  Fly   451 AHPYYNNLYLATGFSGHGVQQSLAVGRAISELIMDGQFRTIDLSRLSFDRLIVDQPMFELNNV 513
            .||..|||:.||||||||:|.|.|||||::|||:||.|:|||||..||.|.:.::|:.|.|.|
 Frog   437 MHPLVNNLFFATGFSGHGLQHSPAVGRAVAELIVDGSFQTIDLSPFSFRRFVSEEPLLERNIV 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37BbNP_536791.1 DadA 113..501 CDD:223737 177/400 (44%)
foxred1NP_001096513.1 DadA 90..491 CDD:223737 180/406 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9712
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62229
OrthoDB 1 1.010 - - D393377at33208
OrthoFinder 1 1.000 - - FOG0003481
OrthoInspector 1 1.000 - - otm48876
Panther 1 1.100 - - O PTHR13847
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3938
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.030

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