Protein Alignment mRpL4 and RPL4

DIOPT Version :9

• Sequence 1: NP_524939.1
• Gene: mRpL4 / 49425
• FlyBaseID: FBgn0001995
• Length: 296
• Species: Drosophila melanogaster
• Sequence 2: NP_563786.1
• Gene: RPL4 / 837243
• AraportID: AT1G07320
• Length: 282
• Species: Arabidopsis thaliana
• Alignment Length: 287
• Identity: 80/287 - (27%)
• Similarity: 126/287 - (43%)
• Gaps: 64/287 - (22%)

  Fly     6 LKTSRQVLYPVARTFSRSGNHGNVVTEAAATVGAPPATRSPLI------LPQDYTDCLPVSRNTA 64
            |.:|.|    :.:|:......|:.......:|.:..|| .|::      :.:.|.|......:||
plant    20 LSSSHQ----IPKTYISVSKLGSGRVSKPLSVSSQLAT-LPILSFEGEKVGETYLDLKAAPEDTA 79

  Fly    65 RQAWIENTDAVAERKVGLIELHPDVFAAQPRVDIIQENVEWQSKYRYVSMAHTKTRAEVRGGGRK 129
            |        ||..|.: :.:|:                    :|.|  ..|.|.||.||||||.|
plant    80 R--------AVVHRAI-VTDLN--------------------NKRR--GTASTLTRGEVRGGGIK 113

  Fly   130 PWPQKGGGRARHGSLRSPMLKGGGVVHGPRSPTTHFYMLPFYKRVLGLTSTLSVKLAQDDLHII- 193
            |:.||..|.||.||.|:|:..|||||.||| |......:...::.|.:::.||...:.:...|:
plant   114 PYSQKKTGHARRGSQRTPLRPGGGVVFGPR-PKDWSIKINRKEKKLAISTALSSAASAEGGAIVV 177

  Fly   194 ----DNVDIPTGDAEFLKD-LIAERNWG------PSVLIVDEDHMFPANICQASDDLGYVNLMPT 247
                :..:.|.     .|| |.|.:.||      ...|::|.|.    |:.::|.::|.:.::..
plant   178 EEFGEKFEKPK-----TKDFLAAMQRWGLDPKEKAMFLMIDVDE----NVAKSSRNIGTLRMLTP 233

  Fly   248 FGLNVYSMLKHDTLVLTVAAVKHLEQR 274
            ..||::.:|..|.||||.|||:.|..|
plant   234 RTLNLFDILNADKLVLTPAAVEFLNAR 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mRpL4	NP_524939.1	Ribosomal_L4	83..274	CDD:278970	62/202 (31%)
RPL4	NP_563786.1	rplD	52..262	CDD:235404	74/251 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0088
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1592747at2759
OrthoFinder	1	1.000	-	-		FOG0003002
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_101056
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	6	5.680