DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL4 and AT3G09630

DIOPT Version :10

Sequence 1:NP_524939.1 Gene:mRpL4 / 49425 FlyBaseID:FBgn0001995 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_187574.1 Gene:AT3G09630 / 820120 AraportID:AT3G09630 Length:406 Species:Arabidopsis thaliana


Alignment Length:250 Identity:57/250 - (22%)
Similarity:89/250 - (35%) Gaps:76/250 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 PDVFAAQPRVDII-----QENVEWQSKYRYVSMAHTKTRAEVRGGGR--KPWPQKGGGRARHGSL 144
            |||..|..|.||:     |.:...:..|.....|..:|.||..|.||  ...|:..||    |:.
plant    30 PDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGG----GTH 90

  Fly   145 RSPMLKGGGVVHGPR--SPTTHFYMLPFYKRV------------LGLTSTLSVKLAQDDLHIIDN 195
            |:.....|.:..|.|  :||..:..  :::||            :..|:..::.:|:.  |.|:|
plant    91 RAGQAAFGNMCRGGRMFAPTKIWRR--WHRRVNVNMKRHAIVSAIAATAVPALVMARG--HKIEN 151

  Fly   196 V-DIPT-------------------------GDAEFLKDLIAER-------------NWGPSVLI 221
            | ::|.                         .|||..|:.|..|             ..||.|:.
plant   152 VPEMPLVVSDSAEAVEKTSAAIKVLKQIGAYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVY 216

  Fly   222 VDEDHMFPANICQASDDLGYVNLMPTFGLNVYSMLKHDTL----VLTVAAVKHLE 272
            ..|.    :.|.:|..:|..|.|.....||:..:.....|    :.|.:|.:.||
plant   217 GTEG----SKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTKSAFEKLE 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL4NP_524939.1 Ribosomal_L4 83..274 CDD:425758 56/249 (22%)
AT3G09630NP_187574.1 PLN00185 2..406 CDD:177779 56/249 (22%)

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