DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mRpL4 and rps16

DIOPT Version :10

Sequence 1:NP_524939.1 Gene:mRpL4 / 49425 FlyBaseID:FBgn0001995 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_001070200.1 Gene:rps16 / 767765 ZFINID:ZDB-GENE-050506-107 Length:146 Species:Danio rerio


Alignment Length:8 Identity:5/8 - (62%)
Similarity:6/8 - (75%) Gaps:0/8 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 RAEVRGGG 127
            |..|:|||
Zfish    69 RVRVKGGG 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL4NP_524939.1 Ribosomal_L4 83..274 CDD:425758 5/8 (63%)
rps16NP_001070200.1 PLN00210 6..146 CDD:177799 5/8 (63%)

Return to query results.
Submit another query.