Sequence 1: | NP_524939.1 | Gene: | mRpL4 / 49425 | FlyBaseID: | FBgn0001995 | Length: | 296 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491416.1 | Gene: | rpl-4 / 172074 | WormBaseID: | WBGene00004415 | Length: | 345 | Species: | Caenorhabditis elegans |
Alignment Length: | 296 | Identity: | 59/296 - (19%) |
---|---|---|---|
Similarity: | 98/296 - (33%) | Gaps: | 125/296 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 91 AAQPRVDIIQENVE-WQSKYRYVSMAHTKTRAEV--------------------RGGGRKPWPQK 134
Fly 135 GGGRARHGSLRSPMLKGGGVVHGPRSPTTH----------------FYMLPFYKR---------- 173
Fly 174 VLGLTSTLSVK----LAQDDLHIIDNV-DIP--TGD---------------------AEFLKDLI 210
Fly 211 AERN---------------WGPSVLIVDEDHMFPANICQASDDLGYVNLMPTFGLNVYSMLKHDT 260
Fly 261 LVLTVAAVKHLEQRLLYQLNRNDAASKGGKFKLDQV 296 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
mRpL4 | NP_524939.1 | Ribosomal_L4 | 83..274 | CDD:278970 | 54/272 (20%) |
rpl-4 | NP_491416.1 | PTZ00428 | 1..345 | CDD:185611 | 59/296 (20%) |
Ribosomal_L4 | 7..264 | CDD:294231 | 56/291 (19%) | ||
Ribos_L4_asso_C | 275..345 | CDD:291072 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0088 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |