DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL4 and Rps16

DIOPT Version :10

Sequence 1:NP_524939.1 Gene:mRpL4 / 49425 FlyBaseID:FBgn0001995 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_001162617.1 Gene:Rps16 / 140655 RGDID:621031 Length:146 Species:Rattus norvegicus


Alignment Length:61 Identity:20/61 - (32%)
Similarity:29/61 - (47%) Gaps:12/61 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 AVA--ERKVGLIELH-PDVFAAQPRVDIIQ----ENVEWQSKYRYVSMAHTKTRAEVRGGG 127
            |||  :|..|||::: ..:...:||.  :|    |.|....|.|:   |....|..|:|||
  Rat    21 AVAHCKRGNGLIKVNGRPLEMIEPRT--LQYKLLEPVLLLGKERF---AGVDIRVRVKGGG 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL4NP_524939.1 Ribosomal_L4 83..274 CDD:425758 14/50 (28%)
Rps16NP_001162617.1 PLN00210 6..146 CDD:177799 20/61 (33%)

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