DRSC/TRiP Functional Genomics Resources

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Protein Alignment kdelr3 and KdelR

DIOPT Version :9

Sequence 1:NP_001008052.1 Gene:kdelr3 / 493414 XenbaseID:XB-GENE-489131 Length:214 Species:Xenopus tropicalis
Sequence 2:NP_477296.1 Gene:KdelR / 34427 FlyBaseID:FBgn0267330 Length:212 Species:Drosophila melanogaster


Alignment Length:211 Identity:144/211 - (68%)
Similarity:178/211 - (84%) Gaps:0/211 - (0%)


- Green bases have known domain annotations that are detailed below.


 Frog     1 MNVFRISGDVSHLLAIIILLLKMWKSKSCAGISGKSQLLFALVFTTRYLDLFTVFISAYNTVMKI 65
            ||:||.:||:||:.||||||||:||::||||||||||:|||:|:.||||||||.::|.||:|||:
  Fly     1 MNIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYNSVMKV 65

 Frog    66 VFLVCAYVTVYLIYGKFRKAYDSENDTFRLEFLLVPVIGLSFLENYEFTPLEILWTFSIYLESVA 130
            :||..:..||||:|.||:..||..:|:||:||||||...||.:.|:|||.:|:||||||||||||
  Fly    66 LFLATSGATVYLMYVKFKATYDHNHDSFRIEFLLVPCALLSLVINHEFTVMEVLWTFSIYLESVA 130

 Frog   131 ILPQLFMISKTGEAESITTHYLFFLGLYRVLYLANWIWRYHTEKFYDQIAVVSGVVQTIFYFDFF 195
            ||||||::|:||||||||:||||.||.||.|||.||::||..|..||.||:.:|||||:.|.|||
  Fly   131 ILPQLFLVSRTGEAESITSHYLFALGSYRALYLLNWVYRYMVESHYDLIAIFAGVVQTVLYCDFF 195

 Frog   196 YLYITKVLKGKKLSLP 211
            |||||||||||||.||
  Fly   196 YLYITKVLKGKKLQLP 211

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
kdelr3NP_001008052.1 ER_lumen_recept 28..169 CDD:366320 95/140 (68%)