DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NVL and Pex1

DIOPT Version :10

Sequence 1:XP_016856867.1 Gene:NVL / 4931 HGNCID:8070 Length:917 Species:Homo sapiens
Sequence 2:NP_652016.1 Gene:Pex1 / 45460 FlyBaseID:FBgn0013563 Length:1006 Species:Drosophila melanogaster


Alignment Length:1017 Identity:248/1017 - (24%)
Similarity:419/1017 - (41%) Gaps:226/1017 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    25 KCGKYVDIGVLASDLQRVYSIDYGRRKRNAFRIQVEKVFSIISSEKELKNLTE------------ 77
            ||....|:    .:|:.|:......:......:..||:...:..:..:.|.|:            
  Fly    82 KCALIADV----LNLRSVHVTPVSSKDWEIIELSTEKISGSVLEQTRIVNSTQILIVWINKSMQV 142

Human    78 -LEDEHLAKRARQGEEDNDVSL-----CHPGF------------SALAQSWLTAVLTSQAQAILP 124
             |..:.|......|..|::..|     .:.|.            :.|::|..||.:..:....|.
  Fly   143 ALTVDRLKPHMNYGRIDHNTELVVAPNLYKGLTNGTSNGVIEENTKLSRSKTTAQVKDELTEKLT 207

Human   125 PQPHRYTESYSDDD---SSMEDYPDPQSANHMNSS--------LLSLYRKGNPDS-----VSNTP 173
            |..|..|.|...:.   :..:|:.:....:....|        :..|:|:...:|     ..:.|
  Fly   208 PLTHSSTVSNVKNTIQRNKRQDHMERLKKDLRRESSRSFEFRVIRGLWREQAQESDVFVNGKHLP 272

Human   174 EMEQRETTSSTPRISSKTGSIPLKTPAKDSEGGWFIDKT--PSVKKDSFFLDLSCEKSNPK---K 233
            |....:........:.|...:.::|...|.|..  :.:|  ||::.::..:.|...|...:   :
  Fly   273 EFFDLDLFYCMHTAADKDYYVRVRTVEDDIEDD--LPETIHPSIELNANLMKLLGIKELERVVLR 335

Human   234 PITEIQDSKDSSLLESDMKRKGKLKNKGSKR-------------KKEDLQEVDGE---------- 275
            |.|.:.:..:...|.::.|...|:.....||             .:|::..::.:          
  Fly   336 PKTTVVNFVEKIELFANKKTHYKIMENAFKRFVIERTQHKPMLFNQEEVVRLEDDLLVTVGILPE 400

Human   276 ------IEAVLQKKAK--ARGLEFQISN-VKFEDVGGNDMTLKEVCKM-----LIHMRHPEVYHH 326
                  ::|...|::|  |..|...:.. :|.|....:.::::::.::     ::.....|:..:
  Fly   401 HFRYCVVDAQFLKESKIYAADLVRPVGEIIKEETPPTSPLSVQDLIQLPEYDKIVDQVVQELRMN 465

Human   327 L------GVVPPRGVLLHGPPGCGKTLLAHAIAGAECSGMITAHCSFD-FSGSNDPPASASQELD 384
            |      .|:....|||.|..|.|||:|...|  .:.......:|.|: |.||..          
  Fly   466 LCLSADNSVMRQCNVLLAGASGTGKTVLVERI--LDQLSRKPDYCHFEFFHGSRS---------- 518

Human   385 LPILKVAAPEIVSGVSGESEQK-LRELFEQAVSNAPCIIFIDEIDAIT-PKREVASKDME----- 442
                        .|...||.|| ||.:|...:.:||.|:.::.:|.:. ...|.:|:|.|     
  Fly   519 ------------KGRKTESIQKDLRNIFTSCLQHAPAIVVLENLDVLAHAAGEQSSQDGEYYNRM 571

Human   443 ----RRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRR-AGRFDREICLGIP--DEAS 500
                .:::.|..|     ||..|     ||...|...:|:..|.. .||...:....:|  :.|.
  Fly   572 ADTVYQLIVQYTT-----NNAIA-----VIATVNELQTLNKRLSSPRGRHVFQTVARLPNLERAD 626

Human   501 RERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEME 565
            ||.||:.||..:.:.:..|....::||.|:...||:.....|...|..  :.|.|.....:..:|
  Fly   627 REIILRELCSHINVAKDLDLVKFSNLTEGYRKCDLVQFVERAIFYAYR--ISKTQPLLTNDQLIE 689

Human   566 DLPS------KGVQ-EERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSS 623
            .|..      :|:| .:|.|.:                .|.:.:..|::.|           |.|
  Fly   690 SLEHTNSYCLQGIQSNQRTGND----------------ADANEMRVEELPG-----------LES 727

Human   624 VQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCG 688
            |                   :|.||::       ::.|.|.|..|.|..|...|||||.||||.|
  Fly   728 V-------------------VGVLEEV-------LMWPSRYPTIFNASPLRNQAGVLLYGPPGTG 766

Human   689 KTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSD 753
            ||.|...:|....|..|||||||||..|:|:||..||.:|.||:::.|||:||||.|:|.|:|..
  Fly   767 KTYLVSQLATSWNLRIISVKGPELLAKYIGQSEENVRNLFNRARSARPCVLFFDEFDSLAPKRGH 831

Human   754 RETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAI 818
            ..||.:.|||||||||:||:|..|.|.::|||:||:::|||:||.||:|:.:...||....|:.|
  Fly   832 DSTGVTDRVVNQLLTELDGVEGLQGVTVIAATSRPELLDPALLRSGRIDRLVECPLPDAPARVRI 896

Human   819 LKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELK 883
            .:.::...:   ||..|:.:..||  :...|||||:.:::..|::.|:::.:|  :.|:||...|
  Fly   897 FEALSSTLS---LDECVDFDWFAG--KTANYTGADIQSILTSANMAAVKEALA--QFGHEKLAKK 954

Human   884 VS--HKHFEEAFKKVRSSISKKDQIMYERL------QESLSR 917
            :|  .||..|:|:..|.|:|..|...|.|.      :|..||
  Fly   955 ISLKQKHLIESFQTTRPSLSASDVAKYHRTYARFTNKEKTSR 996

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NVLXP_016856867.1 Nucleolin_bd 2..72 CDD:465247 7/46 (15%)
CDC48 <277..917 CDD:273521 198/683 (29%)
Pex1NP_652016.1 PEX-1N 93..168 CDD:462729 10/74 (14%)
CDC48 365..983 CDD:273521 199/713 (28%)
RecA-like_PEX1_r2 728..885 CDD:410934 83/182 (46%)

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