DRSC/TRiP Functional Genomics Resources

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Protein Alignment NVL and Nsf2

DIOPT Version :10

Sequence 1:XP_016856867.1 Gene:NVL / 4931 HGNCID:8070 Length:917 Species:Homo sapiens
Sequence 2:NP_788676.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster


Alignment Length:861 Identity:202/861 - (23%)
Similarity:340/861 - (39%) Gaps:245/861 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    95 DVSLCHPGFSALAQSWLTAVLTSQAQAILPPQPHRYTESYSDDDSSMEDYPDPQSANHMNSSLLS 159
            ::.|.|.|||.:.:.|.|..:..:    :..:|:|:..|                     :.:::
  Fly    60 ELPLGHVGFSLVQRKWATLSINQE----IDVRPYRFDAS---------------------ADIIT 99

Human   160 LYRKGNPDSVSNTPEMEQRETTSSTPRISSKT--------GSIPLKTPAKDSEGGWFIDKTPSVK 216
            |        ||...:..|::||:..|..|.:.        ..:||.           :.:|...:
  Fly   100 L--------VSFETDFLQKKTTTQEPYDSDEMAKEFLMQFAGMPLT-----------VGQTLVFQ 145

Human   217 -KDSFFLDLSCEKSNPKKPITEIQDSKDSSLLESDMKRKGK-LKNKGSKRKKEDLQEVDGEIEAV 279
             ||..||.|:.:......|.| :.|    ||.::...|.|: |.|...:.:|.:...::      
  Fly   146 FKDKKFLGLAVKTLEAVDPRT-VGD----SLPKTRNVRFGRILGNTVVQFEKAENSVLN------ 199

Human   280 LQKKAKARGLEFQISNVKFE----DVGGNDMTLKEVCKMLIHMR--HPEVYHHLGVVPPRGVLLH 338
            ||.::|.:.:...|.|..::    .:||.|.....:.:.....|  .||:...||:...:|:||:
  Fly   200 LQGRSKGKIVRQSIINPDWDFGKMGIGGLDKEFNAIFRRAFASRVFPPELVEQLGIKHVKGILLY 264

Human   339 GPPGCGKTLLAHAIAGAECSGMITAHCSFDFSGSNDPPASASQELDLPILKVAAPEIVSGVSGES 403
            ||||.||||:|..|     ..|:.|         .:|..            |..|:|:....|||
  Fly   265 GPPGTGKTLMARQI-----GTMLNA---------REPKI------------VNGPQILDKYVGES 303

Human   404 EQKLRELFEQA--------VSNAPCIIFIDEIDAITPKR-EVA-SKDMERRIVAQLLTCMD---D 455
            |..:|.||.:|        .::...||..||||||...| .|| :..:...:|.|||..:|   .
  Fly   304 EANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQ 368

Human   456 LNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLR----LPQ 516
            |||      :||||.|||.|.:|.||.|.||.:.::.:.:|:|..|.:||....:::|    :..
  Fly   369 LNN------ILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIAS 427

Human   517 AFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSKGVQEERLGTEP 581
            ..|...:|..|..|.||:|..|.|.|...|:||::.                    .:.::..:|
  Fly   428 DVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNRLIK--------------------ADSKVHVDP 472

Human   582 TSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVAL-SSVQPSAKREGFVTVPNVTWADIG 645
                                   |.|:.|.:...||:.|| :.::|:                .|
  Fly   473 -----------------------EAMEKLRVTRADFLHALDNDIKPA----------------FG 498

Human   646 ALEDIREEL------------TMAILAPVRNPDQFKAL---GLVTPAGVLLAGPPGCGKTLLAKA 695
            |.:::.|.|            |..:...:.:..|.||.   |||:   ||:.|.|..||:.||..
  Fly   499 AAQEMLENLLARGIINWGPPVTELLEDGMLSVQQAKATESSGLVS---VLIEGAPNSGKSALAAN 560

Human   696 VANESGLNFISVKGPELLNMYVGESERA----VRQVFQRAKNSAPCVIFFDEVDALC------PR 750
            :|..|...|:.|..||.:   ||.:|.|    :|::|..|..|....|..|.|:.|.      ||
  Fly   561 LAQLSDFPFVKVCSPEDM---VGFTESAKCLHIRKIFDDAYRSTLSCIVVDNVERLLDYGPIGPR 622

Human   751 RSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADR 815
            .|:    .:::.:..||.:..  ...:::.|:..::|.|:::...:............|..|.:.
  Fly   623 YSN----LTLQALLVLLKKQP--PKGRKLLILCTSSRRDVLEEMEMLSAFTSVLHVSNLSTPENV 681

Human   816 LAILKTITKNGTKPPLDADV----NLEAIAGDLRCDCYTGADLSALVRE--ASICALRQEMARQK 874
            ||:|.           |:|:    .|::||..:     .|..|...:::  |.|..:||....|:
  Fly   682 LAVLD-----------DSDLFSPEELQSIARKM-----AGKRLCIGIKKLLALIDMIRQSEPHQR 730

Human   875 ------SGNEKGELKV 884
                  ...|:|.|::
  Fly   731 VIKFLSKMEEEGGLEM 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NVLXP_016856867.1 Nucleolin_bd 2..72 CDD:465247
CDC48 <277..917 CDD:273521 166/669 (25%)
Nsf2NP_788676.1 CDC48_N 9..89 CDD:215012 7/32 (22%)
CDC48_2 117..>170 CDD:215011 13/68 (19%)
RecA-like_NSF-SEC18_r1-like 224..400 CDD:410912 68/207 (33%)
CDC48 <225..>611 CDD:273521 131/482 (27%)
Blue background indicates that the domain is not in the aligned region.

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