DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NVL and Nvl

DIOPT Version :9

Sequence 1:XP_016856867.1 Gene:NVL / 4931 HGNCID:8070 Length:917 Species:Homo sapiens
Sequence 2:NP_001099450.1 Gene:Nvl / 289323 RGDID:1311270 Length:855 Species:Rattus norvegicus


Alignment Length:917 Identity:732/917 - (79%)
Similarity:784/917 - (85%) Gaps:62/917 - (6%)


- Green bases have known domain annotations that are detailed below.


Human     1 MKPRPAGFVDNKLKQRVIQYLTSNKCGKYVDIGVLASDLQRVYSIDYGRRKRNAFRIQVEKVFSI 65
            ||||||.|||.||||||||||:||:||||||.|:|||||||:||:||||||||||||||||||:|
  Rat     1 MKPRPAVFVDRKLKQRVIQYLSSNRCGKYVDTGILASDLQRMYSVDYGRRKRNAFRIQVEKVFNI 65

Human    66 ISSEKELKNLTELEDEHLAKRARQGEEDNDVSLCHPGFSALAQSWLTAVLTSQAQAILPPQPHRY 130
            ||||||.|||.||||.||||||||.|:|                                   .|
  Rat    66 ISSEKEHKNLKELEDGHLAKRARQDEDD-----------------------------------EY 95

Human   131 TESYSDDDSSMEDYPDPQSANHMNSSLLSLYRKGNPDSVSNTPEMEQRETTSSTPRISSKTGSIP 195
            |||||||||:|||||||||||||||||||||||||.||||.||::||||..:|:|.:||||.|:|
  Rat    96 TESYSDDDSNMEDYPDPQSANHMNSSLLSLYRKGNSDSVSTTPKLEQREDATSSPLLSSKTDSMP 160

Human   196 LKTPAKDSEGGWFIDKTPSVKKDSFFLDLSCEKSNPKKPITEIQDSKDSSLLESDMKRKGKLKNK 260
            |||||::.||||||||||..:|:|..||||.::||.||....||:.|||||||||.|||.:.|.|
  Rat   161 LKTPAREPEGGWFIDKTPGGQKESLPLDLSDDQSNCKKQDPGIQNLKDSSLLESDKKRKSRAKGK 225

Human   261 GSKRKKEDLQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIHMRHPEVYH 325
            |:|||.|.|||.||||||:|||:|||:..|.|||:||||||||||.||||||||||||||||||.
  Rat   226 GNKRKTEGLQEADGEIEAILQKRAKAKSTELQISSVKFEDVGGNDATLKEVCKMLIHMRHPEVYQ 290

Human   326 HLGVVPPRGVLLHGPPGCGKTLLAHAIAGAECSGMITAHCSFDFSGSNDPPASASQELDLPILKV 390
            |||||||||||||||||||||||||||||                           |||||||||
  Rat   291 HLGVVPPRGVLLHGPPGCGKTLLAHAIAG---------------------------ELDLPILKV 328

Human   391 AAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDD 455
            ||||||||||||||||||:||:|||||||||:|||||||||||||||||||||||||||||||||
  Rat   329 AAPEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLLTCMDD 393

Human   456 LNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDF 520
            ||||||||||||:||||||||||||||||||||||:||||||||||||||||||||||||:.|:|
  Rat   394 LNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVCLGIPDEASRERILQTLCRKLRLPETFNF 458

Human   521 CHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSKGVQEERLGTEPTSET 585
            .||||||||||||||||||||||:|||:||||:.||||:..||...|||.|.|...||.||.|||
  Rat   459 SHLAHLTPGFVGADLMALCREAAVCAVHRVLMRRQEQQRTEPETGGLPSDGEQGRSLGAEPPSET 523

Human   586 QDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDI 650
            ||||||||||||||||:|||||||||:||||||||||.||||||||||||||||||||:||||||
  Rat   524 QDELQRLLGLLRDQDPISEEQMQGLCLELNDFIVALSEVQPSAKREGFVTVPNVTWADVGALEDI 588

Human   651 REELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNM 715
            |||||||||||||||:||:|||||.||||||||||||||||||||||||||||||||||||||||
  Rat   589 REELTMAILAPVRNPEQFRALGLVAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNM 653

Human   716 YVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVF 780
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
  Rat   654 YVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVF 718

Human   781 IMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLR 845
            |:|||||||||||||||||||||||||||||||||:||||||||||||||||.||:|||||.|.|
  Rat   719 ILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVDLEAIANDHR 783

Human   846 CDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKVRSSISKKDQIMYER 910
            |||||||||||||||||:||||||:..||:|....||.||||||||||:||:.|||.|||.|||.
  Rat   784 CDCYTGADLSALVREASLCALRQEITGQKNGIGTAELTVSHKHFEEAFRKVKPSISVKDQRMYEA 848

Human   911 LQESLSR 917
            ||.|||:
  Rat   849 LQRSLSQ 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NVLXP_016856867.1 None
NvlNP_001099450.1 Nucleolin_bd 2..71 CDD:406995 59/68 (87%)
CDC48 <255..855 CDD:273521 538/626 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83691537
Domainoid 1 1.000 344 1.000 Domainoid score I13120
eggNOG 1 0.900 - - E1_COG0464
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1902
Inparanoid 1 1.050 1449 1.000 Inparanoid score I2944
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG53526
OrthoDB 1 1.010 - - D16459at314146
OrthoFinder 1 1.000 - - FOG0000137
OrthoInspector 1 1.000 - - oto138307
orthoMCL 1 0.900 - - OOG6_102053
Panther 1 1.100 - - LDO PTHR23077
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2802
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1818.270

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