DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SERCA and PMA2

DIOPT Version :10

Sequence 1:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster
Sequence 2:NP_015289.1 Gene:PMA2 / 856071 SGDID:S000005957 Length:947 Species:Saccharomyces cerevisiae


Alignment Length:1001 Identity:254/1001 - (25%)
Similarity:407/1001 - (40%) Gaps:251/1001 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GHSKTVEQSLNFFGTDPERGLTLDQIKANQKKYGPNELPTEEGKSIWQLVLEQFDDLLVKILL-L 67
            |.....|:.|:   |||..|||.|::...:||||.|:: .||.:|           |:||.|: .
Yeast   100 GQRVVPEKDLS---TDPAYGLTSDEVARRRKKYGLNQM-AEENES-----------LIVKFLMFF 149

  Fly    68 AAIISFVLALFEEHEETFTAFVEPLVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKVVRQ 132
            ...|.||:..........:.:|:..||..:|:.||.||..||..|.|.::.||:.......|:|.
Yeast   150 VGPIQFVMEAAAILAAGLSDWVDVGVICALLLLNASVGFIQEFQAGSIVDELKKTLANTATVIRD 214

  Fly   133 DKSGIQKVRAKEIVPGDLVEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVSVIKHTDAIPDP 197
            .:  :.::.|.|:|||:::::..|...|||.||. .....|:||||.:||||::..||..     
Yeast   215 GQ--LIEIPANEVVPGEILQLESGTIAPADGRIV-TEDCFLQIDQSAITGESLAAEKHYG----- 271

  Fly   198 RAVNQDKKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSK 262
                    :.:||.:.|..|:|..||..||.:|.:|:....:.:...::....:.|:..|..|..
Yeast   272 --------DEVFSSSTVKTGEAFMVVTATGDNTFVGRAAALVGQASGVEGHFTEVLNGIGIILLV 328

  Fly   263 VISVICVAVWAINIGHFNDPAHGGSWIKGAIYY--------FKIAVALAVAAIPEGLPAVITTCL 319
            ::....:.||.                  |.:|        .:..:.:.:..:|.|||||:||.:
Yeast   329 LVIATLLLVWT------------------ACFYRTVGIVSILRYTLGITIIGVPVGLPAVVTTTM 375

  Fly   320 ALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKVEGND---SSFLE 381
            |:|...:|||.|||:.|.::|:|....::|||||||||.|::|:...:..:.|..:|   ::.|.
Yeast   376 AVGAAYLAKKQAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHEPYTVEGVSPDDLMLTACLA 440

  Fly   382 FEMTGSTYEPIGEVFLNGQRIKAADYDTLQELSTICIMCNDSAIDYNEFKQAFEKVGEATETALI 446
            ........:.|.:.||.                        |.|:|.:.|.|.            
Yeast   441 ASRKKKGLDAIDKAFLK------------------------SLIEYPKAKDAL------------ 469

  Fly   447 VLAEKLNSFSVNKSGLDRRSAAIACRGEIETKWKKEFTLE---FSRDRKSMSSYCTPLKASRLGT 508
                                          ||:|   .||   |....|.:::.....:..|:  
Yeast   470 ------------------------------TKYK---VLEFHPFDPVSKKVTAVVESPEGERI-- 499

  Fly   509 GPKLFVKGAPEGVLERCTHARVGTTKVPLTSALKAKILALTGQYGTGRDTLRCLALAVADSPMKP 573
               :.|||||..||:...........|......|...||..|        .|.|.:|        
Yeast   500 ---VCVKGAPLFVLKTVEEDHPIPEDVHENYENKVAELASRG--------FRALGVA-------- 545

  Fly   574 DEMDLGDSTKFYQYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICRR 638
              ...|:.    .:|:    :||:..:||||.:...:|...|..|:|:.::|||....|:..||:
Yeast   546 --RKRGEG----HWEI----LGVMPCMDPPRDDTAQTINEARNLGLRIKMLTGDAVGIAKETCRQ 600

  Fly   639 IGVFAE--DEDTTGKSYSGREFDDLSPTEQKAAVARSRLFSRVEPQHKSKIVEFLQSMNEISAMT 701
            :|:...  :.:..|....|    |:..:|....|..:..|:.|.||||.::||.||:...:.|||
Yeast   601 LGLGTNIYNAERLGLGGGG----DMPGSELADFVENADGFAEVFPQHKYRVVEILQNRGYLVAMT 661

  Fly   702 GDGVNDAPALKKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLIS 766
            ||||||||:||||:.|||:...|..|:|||::|......|:|:.|::..|.|::.|..::.|.|:
Yeast   662 GDGVNDAPSLKKADTGIAVEGATDAARSAADIVFLAPGLSAIIDALKTSRQIFHRMYSYVVYRIA 726

  Fly   767 SNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKPPRKADEGLISG 831
                  :|:.|...||          ||:.::.:.|....:.|                      
Yeast   727 ------LSLHLEIFLG----------LWIAILNNSLDINLIVF---------------------- 753

  Fly   832 WLFFRYMAIGFYVGAATVGAAAWWFVFSDEGPKLSYWQLTHHLSCLGGGDEFKGVDCKIFSDPHA 896
                    |..:...||:..|   :..:...|:...|.|..    |.|.....|:...|.|....
Yeast   754 --------IAIFADVATLTIA---YDNAPYAPEPVKWNLPR----LWGMSIILGIVLAIGSWITL 803

  Fly   897 MTMALSVLVTIEMLNAMN-------SLSENQSLITMPPWCNLWLI---------GSMALSFTLHF 945
            .||.|.....|:...|||       ||:||            |||         .|...|:.|..
Yeast   804 TTMFLPNGGIIQNFGAMNGVMFLQISLTEN------------WLIFVTRAAGPFWSSIPSWQLAG 856

  Fly   946 VILYVDVLSTVFQVTPLSAEEWITVM 971
            .:..||:::|:|.:....:|.|..::
Yeast   857 AVFAVDIIATMFTLFGWWSENWTDIV 882

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 253/1000 (25%)
PMA2NP_015289.1 P-type_ATPase_H 116..903 CDD:319771 248/982 (25%)

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