DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SERCA and YPK9

DIOPT Version :9

Sequence 1:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster
Sequence 2:NP_014934.1 Gene:YPK9 / 854466 SGDID:S000005817 Length:1472 Species:Saccharomyces cerevisiae


Alignment Length:1192 Identity:232/1192 - (19%)
Similarity:412/1192 - (34%) Gaps:397/1192 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DPE--------RGLTLDQIKANQKKYGPNELPTEEGKSIWQLVLEQFDDLLVKILL----LAAII 71
            ||:        .|||....:..:..:|.|::         .|.::...::|...:|    :..:.
Yeast   449 DPDWVDLSTVSNGLTKGVQEDRELAFGKNQI---------NLRMKTTSEILFNEVLHPFYVFQVF 504

  Fly    72 SFVLALFEEHEETFTAFVEPLVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKVVRQDKSG 136
            |.:|...:|:      :.....|.||.:.:....:.:::.....:..:..:..:: :|:| ||..
Yeast   505 SIILWGIDEY------YYYAACIFLISVLSIFDSLNEQKKVSRNLAEMSHFHCDV-RVLR-DKFW 561

  Fly   137 IQKVRAKEIVPGDLVEVSVGDK----IPADIRITHIYSTTLRIDQSILTGESVSVIKH------- 190
             ..:.:.|:||||:.|||  |.    :|.|   :.:.|:...:::|:||||||.|.|.       
Yeast   562 -TTISSSELVPGDIYEVS--DPNITILPCD---SILLSSDCIVNESMLTGESVPVSKFPATEETM 620

  Fly   191 ---TDAIPDPRAVNQDKKNILFSGTN-----VAAGK--ARGVVIGTGLSTAIGKIRTEMSETEEI 245
               .|.....:..:...|:.|::|||     :|.|:  |..:|:.||.||..|.:...|...:  
Yeast   621 YQLCDDFQSTQISSFVSKSFLYNGTNIIRARIAPGQTAALAMVVRTGFSTTKGSLVRSMVFPK-- 683

  Fly   246 KTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFNDPAHGGSWIKGAIYYFKI----------AV 300
            .|..:...|.|  :....:|:|.:..:.::                .:.:.|:          |:
Yeast   684 PTGFKFYRDSF--KYIGFMSLIAIFGFCVS----------------CVQFIKLGLDKKTMILRAL 730

  Fly   301 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSV-- 363
            .:....:|..|||.:|........|:.:|.....|...:...|...|:|.|||||||.:.:.|  
Yeast   731 DIITIVVPPALPATLTIGTNFALSRLKEKGIFCISPTRLNISGKIDVMCFDKTGTLTEDGLDVLG 795

  Fly   364 ----------SRMF---------IFDKVEGND-SSFLEFEMTGSTYEPIGEVFLNGQRIKAADYD 408
                      .:.|         :|.|...|| ||.|:|:.......     .|....:::.|.:
Yeast   796 VQISEPNGVRGQKFGELLSDIRQVFPKFSLNDCSSPLDFKSRNFFMS-----LLTCHSLRSVDGN 855

  Fly   409 TLQELSTICIMCNDSAIDYNEF------------KQAFEKVGEA-------TETALIVLA----- 449
            .|.:           .:|:..|            |:||..:.|.       .|.:.|:.|     
Yeast   856 LLGD-----------PLDFKMFQFTGWSFEEDFQKRAFHSLYEGRHEDDVFPENSEIIPAVVHPD 909

  Fly   450 --EKLNSFSVNK--------------SGLDRRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYC 498
              .:.|:|:.|.              |.|.|.|..:....: :..|.                  
Yeast   910 SNNRENTFTDNDPHNFLGVVRSFEFLSELRRMSVIVKTNND-DVYWS------------------ 955

  Fly   499 TPLKASRLGTGPKLFVKGAPEGVLERCTHARVGTTKVPLTSALKAKILALTGQYGTGRDTLRCL- 562
                          |.|||||.:.|.|.           .|.|.|..          .:.|||. 
Yeast   956 --------------FTKGAPEVISEICN-----------KSTLPADF----------EEVLRCYT 985

  Fly   563 -----ALAVADSPMKPDEMDLGDSTKFYQYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVI 622
                 .:|.|...:..............:.|.||.|:|.:...:..:||..:::...:.|.||.|
Yeast   986 HNGYRVIACAGKTLPKRTWLYSQKVSREEVESNLEFLGFIIFQNKLKKETSETLKSLQDANIRTI 1050

  Fly   623 VITGDNKATAEAICRRIGVF---------AEDEDTTGK--------------------------- 651
            :.||||..||.::.|..|:.         ..|....|:                           
Yeast  1051 MCTGDNILTAISVGREAGLIQCSRVYVPSINDTPLHGEPVIVWRDVNEPDKILDTKTLKPVKLGN 1115

  Fly   652 -------------SYSG-------REFDDLSPTEQKAAVARSRLFSRVEPQHKSKIVEFLQSMNE 696
                         :.||       |:.:::........:..|.:::|:.|..|.:::..||.::.
Yeast  1116 NSVESLRECNYTLAVSGDVFRLLFRDENEIPEEYLNEILLNSSIYARMSPDEKHELMIQLQKLDY 1180

  Fly   697 ISAMTGDGVNDAPALKKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVSAVEEGRA--------- 752
            .....|||.||..|||.|::||::..  |.|..||.......|.|.::..:.||||         
Yeast  1181 TVGFCGDGANDCGALKAADVGISLSE--AEASVAAPFTSKIFNISCVLDVIREGRAALVTSFACF 1243

  Fly   753 ----IYNNMKQFIR----YLISSNIGEVVSIFLTAALGLPEALIPVQLLW-------------VN 796
                :|:.: |||.    |...||:|:...:::...|.:|   |.:.:.|             .|
Yeast  1244 QYMSLYSAI-QFITITILYSRGSNLGDFQFLYIDLLLIVP---IAICMSWSKSYEKIDKKRPSAN 1304

  Fly   797 LVTDGLPATALGFNPPDLDIMEKPPRKADEGLISGWLFFRYMAIGFYVGAATVGAAAWWFVFSDE 861
            ||:                     |:.....|||.:|.|.:..|.             |.:..  
Yeast  1305 LVS---------------------PKILVPLLISVFLVFLFQFIP-------------WIIVQ-- 1333

  Fly   862 GPKLSYWQLTHHLSCLGGGDEFKGVDCKI---------------------FSDPHAMTMALSVLV 905
              |:| |.:.   ..:||.|..:..|..:                     :.:|.:......|.:
Yeast  1334 --KMS-WYIK---PIVGGDDAVQSSDNTVLFFVSNFQYILTAIVLSVGPPYREPMSKNFEFIVDI 1392

  Fly   906 TIE-----MLNAMNSLSENQSLITMPPWCNLWLIGSMALSFTLHFVILYVDVLSTVFQV-TPLSA 964
            |:.     :|..:::.|....::.:.|..|         |||: |:|::| :|:...|: .|.|.
Yeast  1393 TVSIGASLLLMTLDTESYLGKMLQLTPISN---------SFTM-FIIVWV-ILNYYAQLYIPPSI 1446

  Fly   965 EEWITVMKFSIPV-VLLDETLK 985
            :.|:...|.|... :|:.|.:|
Yeast  1447 KGWLKKKKSSKKYKLLIQEEMK 1468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 232/1192 (19%)
YPK9NP_014934.1 P-ATPase-V 307..1431 CDD:273738 221/1152 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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