DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SERCA and ACA10

DIOPT Version :10

Sequence 1:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster
Sequence 2:NP_194719.1 Gene:ACA10 / 829112 AraportID:AT4G29900 Length:1069 Species:Arabidopsis thaliana


Alignment Length:1048 Identity:295/1048 - (28%)
Similarity:470/1048 - (44%) Gaps:204/1048 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 RGLTLDQIKANQKK---------------YGPNELPTEEGKSIWQLVLEQFDDLLVKILLLAAII 71
            |||: |.:|.|.:|               :|.|..|.::|:|.|:.|.|...||.:.||::||:.
plant   140 RGLS-DLLKTNLEKGIHGDDDDILKRKSAFGSNTYPQKKGRSFWRFVWEASQDLTLIILIVAAVA 203

  Fly    72 SFVLALFEEHEET--FTAFVEPLVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKVVRQDK 134
            |..|.:..|..|.  :........:||:::..|.....|....::..|..:....|:.:..|:.:
plant   204 SLALGIKTEGIEKGWYDGISIAFAVLLVIVVTATSDYRQSLQFQNLNEEKRNIRLEVTRDGRRVE 268

  Fly   135 SGIQKVRAKEIVPGDLVEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVSVIKHTDAIPDPRA 199
            ..|.     :||.||::.:::||::|||..:  :...:|.:|:|.:||||..|.|          
plant   269 ISIY-----DIVVGDVIPLNIGDQVPADGVL--VAGHSLAVDESSMTGESKIVQK---------- 316

  Fly   200 VNQDKKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKV- 263
             |..|...|.||..||.|....:|.|.|::|..|.:...:||....:||||.:|:.....:..| 
plant   317 -NSTKHPFLMSGCKVADGNGTMLVTGVGVNTEWGLLMASVSEDNGGETPLQVRLNGVATFIGIVG 380

  Fly   264 ISVICVAVWAINI----GHFNDPAHGGSWIKG----------AIYYFKIAVALAVAAIPEGLPAV 314
            ::|..|.::.:.:    ||..:...|..:|.|          .:..|.:||.:.|.|:|||||..
plant   381 LTVAGVVLFVLVVRYFTGHTKNEQGGPQFIGGKTKFEHVLDDLVEIFTVAVTIVVVAVPEGLPLA 445

  Fly   315 ITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFI-FDKVEGNDSS 378
            :|..||...|:|....|:||.|.:.||:|..:.||||||||||.|:|:|...:. ..|::..|||
plant   446 VTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVECYAGLQKMDSPDSS 510

  Fly   379 ------FLEFEMTGSTYEPIGEVFLNGQRIKAADYDTLQELSTICIMCNDSAIDYNEFKQAFEKV 437
                  |....:.|..:...|.||    |.::.:                           .:..
plant   511 SKLPSAFTSILVEGIAHNTTGSVF----RSESGE---------------------------IQVS 544

  Fly   438 GEATETALIVLAEKLN-SFSVNKSGLDRRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCTPL 501
            |..||.|::..|.||. .|...||    .|:|:            :| ..|:.::|         
plant   545 GSPTERAILNWAIKLGMDFDALKS----ESSAV------------QF-FPFNSEKK--------- 583

  Fly   502 KASRLGTGPK-------LFVKGAPEGVLERCTH--------ARVGTTKVPLTSALKAKILALTGQ 551
               |.|...|       :..|||.|.||..|||        ..:...|:   ..||..|..:..:
plant   584 ---RGGVAVKSPDSSVHIHWKGAAEIVLGSCTHYMDESESFVDMSEDKM---GGLKDAIDDMAAR 642

  Fly   552 YGTGRDTLRCLALAV----ADSPMKPDEMDLGDSTKFYQYEVNLTFVGVVGMLDPPRKEVFDSIV 612
                  :|||:|:|.    ||. :..||..|   :::...|.:|..:.:||:.||.|..|.:|::
plant   643 ------SLRCVAIAFRTFEADK-IPTDEEQL---SRWELPEDDLILLAIVGIKDPCRPGVKNSVL 697

  Fly   613 RCRAAGIRVIVITGDNKATAEAICRRIGVFAEDEDTTGKS-YSGREFDDLSPTEQKAAVARSRLF 676
            .|:.||::|.::||||..||:||....|:.|.|.|.:..: ..|:.|...|..|:........:.
plant   698 LCQQAGVKVRMVTGDNIQTAKAIALECGILASDSDASEPNLIEGKVFRSYSEEERDRICEEISVM 762

  Fly   677 SRVEPQHKSKIVEFLQSMNEISAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSAAEMVLADDNF 740
            .|..|..|..:|:.|:....:.|:||||.||||||.:|:||:||| .||.|||..:::::.||||
plant   763 GRSSPNDKLLLVQSLKRRGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNF 827

  Fly   741 SSIVSAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEA-LIPVQLLWVNLVTDGLPA 804
            .|:|..|..||::|.|:::||::.::.|:..:| |.:.||:...|. |..||||||||:.|.|.|
plant   828 ESVVKVVRWGRSVYANIQKFIQFQLTVNVAALV-INVVAAISAGEVPLTAVQLLWVNLIMDTLGA 891

  Fly   805 TALGFNPPDLDIMEKPPRKADEGLISG--W--LFFRYMAIGFYVGAATVGAAAWWFVFSDEGPKL 865
            .||...||...:|::.|....|.||:.  |  ||.:.|                           
plant   892 LALATEPPTDHLMDRAPVGRREPLITNIMWRNLFIQAM--------------------------- 929

  Fly   866 SYWQLTHHLSCLGGGDEFKGVD-CKIFSDPHA----MTMALSVLVTIEMLNAMNSLSENQSLITM 925
              :|:|..|..     .|:|:. ..:.|.|:|    .|:..:..|..::.|..|:...::..|..
plant   930 --YQVTVLLIL-----NFRGISILHLKSKPNAERVKNTVIFNAFVICQVFNEFNARKPDEINIFR 987

  Fly   926 PPWCNLWLIGSMALSFTLHFVILYVDVLSTVFQVTPLSAEEWITVMKFSIPVVLLDETLKFVARK 990
            ....|...:|.::::..|..||  |:.|.|....|.|..|.|:.    .|.:..:...|..:.:.
plant   988 GVLRNHLFVGIISITIVLQVVI--VEFLGTFASTTKLDWEMWLV----CIGIGSISWPLAVIGKL 1046

  Fly   991 IADGESPI 998
            |...|:|:
plant  1047 IPVPETPV 1054

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 292/1037 (28%)
ACA10NP_194719.1 CaATP_NAI 28..71 CDD:432606
ATPase-IIB_Ca 133..1049 CDD:273668 293/1041 (28%)
Blue background indicates that the domain is not in the aligned region.

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