DRSC/TRiP Functional Genomics Resources

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Protein Alignment SERCA and AT3G63380

DIOPT Version :10

Sequence 1:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster
Sequence 2:NP_191897.1 Gene:AT3G63380 / 825513 AraportID:AT3G63380 Length:1033 Species:Arabidopsis thaliana


Alignment Length:1013 Identity:279/1013 - (27%)
Similarity:468/1013 - (46%) Gaps:155/1013 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TDPERGLTLDQIKANQKK--YGPNELPTEEGKSIWQLVLEQFDDLLVKILLLAAIISFVLALFEE 80
            |:|.:|:..::.:.::::  :|.|.......|.:...|.|.|.||.:.|||:.||.|....: :|
plant   120 TNPTKGIHGNEQEVSRRRDLFGSNTYHKPPPKGLLFFVYEAFKDLTILILLVCAIFSLGFGI-KE 183

  Fly    81 H------EETFTAFVEPLVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKVVRQDKSGIQK 139
            |      .|..:.||   .:.|:::.:|:....|||..:...:.....:.|   |:|..:.  |.
plant   184 HGIKEGWYEGGSIFV---AVFLVIVVSALSNFRQERQFDKLSKISNNIKVE---VLRDSRR--QH 240

  Fly   140 VRAKEIVPGDLVEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVSVIKHTDAIPDPRAVNQDK 204
            :...::|.||:|.:.:||:||||......:|  |::|:|.:||||           |...|:...
plant   241 ISIFDVVVGDVVFLKIGDQIPADGLFLEGHS--LQVDESSMTGES-----------DHLEVDHKD 292

  Fly   205 KNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKV-ISVIC 268
            ...|||||.:..|.|:.:|:..|:||..|:..:.:::....:||||.:||.....:.|: ::|..
plant   293 NPFLFSGTKIVDGFAQMLVVSVGMSTTWGQTMSSINQDSSERTPLQVRLDTLTSTIGKIGLTVAA 357

  Fly   269 VAVWAINIGHF--NDPAHG-----GS------WIKGAIYYFKIAVALAVAAIPEGLPAVITTCLA 320
            :.:..:.:.:|  |....|     ||      .:...:.....||.:.|.|||||||..:|..||
plant   358 LVLVVLLVRYFTGNTEKEGKREYNGSKTPVDTVVNSVVRIVAAAVTIVVVAIPEGLPLAVTLTLA 422

  Fly   321 LGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFI-FDKVEGNDSSFLEFEM 384
            ...:||....|:||.|.:.||:|..:|||:|||||||.|:|.|::.:: .:.:..:.:..:..::
plant   423 YSMKRMMSDQAMVRKLSACETMGSATVICTDKTGTLTLNEMKVTKFWLGQESIHEDSTKMISPDV 487

  Fly   385 TGSTYEPIGEVFLNGQRIKAADYDTLQELSTICIMCNDSAIDYNEFKQAFEKVGEATETALIVLA 449
            ....|:..|                |....::|:..:.|..:::         |..||.||:   
plant   488 LDLLYQGTG----------------LNTTGSVCVSDSGSTPEFS---------GSPTEKALL--- 524

  Fly   450 EKLNSFSVNKSGLDRRSAAIACRGEIETKWKKE-FTLEFSRDRKSMSSYCTPLKASRLGTGPKLF 513
                |::|...|:|..|          .|.|.| ..:|.....|..|......|:...   ..:.
plant   525 ----SWTVLNLGMDMES----------VKQKHEVLRVETFSSAKKRSGVLVRRKSDNT---VHVH 572

  Fly   514 VKGAPEGVLERCTHARVGTTKVPL-TSALKAKILALTGQYGTGRDTLRCLA----LAVADSPMKP 573
            .|||.|.||..|:|....|..|.| .|..|::|.|:.  .|....:|||:|    :|..||.::.
plant   573 WKGAAEMVLAMCSHYYTSTGSVDLMDSTAKSRIQAII--QGMAASSLRCIAFAHKIASNDSVLEE 635

  Fly   574 DEMDLGDSTKFYQYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICRR 638
            |               .||.:|:||:.||.|..|..::..|:.||:.:.:|||||..||:||...
plant   636 D---------------GLTLMGIVGLKDPCRPGVSKAVETCKLAGVTIKMITGDNVFTAKAIAFE 685

  Fly   639 IGVF-AEDEDTTGKSYSGREFDDLSPTEQKAAVARSRLFSRVEPQHKSKIVEFLQSMNEISAMTG 702
            .|:. ..|:|.......|.:|.:.:..|:...|.:.|:.:|..|..|..:|:.|:....:.|:||
plant   686 CGILDHNDKDEEDAVVEGVQFRNYTDEERMQKVDKIRVMARSSPSDKLLMVKCLRLKGHVVAVTG 750

  Fly   703 DGVNDAPALKKAEIGIAMG-SGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLIS 766
            ||.|||||||:|:||::|| .||.|||.::::|:.||||:|:.:.::.||.:|||:::||::.::
plant   751 DGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLT 815

  Fly   767 SNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKPPRKADEGLISG 831
            .|:..:|..|:.|.......|..||||||||:.|.|.|.||....|..:::::.|....|.||:.
plant   816 VNVAALVINFIAAISAGEVPLTAVQLLWVNLIMDTLGALALATERPTNELLKRKPVGRTEALITN 880

  Fly   832 WLFFRYMAIGFYVGAATVGAAAWWFVFSDEGPKLSYWQLTHHLSCLGGGDEFKGVDCKIFSDPHA 896
            .::...:....|..|.                          |..|    :|||:  .|||....
plant   881 VMWRNLLVQSLYQIAV--------------------------LLIL----QFKGM--SIFSVRKE 913

  Fly   897 M--TMALSVLVTIEMLNAMNSLSENQSLITMPPWCNLWLIGSMALSFTLHFVILYVDVLSTVFQV 959
            :  |:..:..|..::.|..|:....:..:......|...||.:|::..|.  ::.|:.|......
plant   914 VKDTLIFNTFVLCQVFNEFNAREMEKKNVFKGLHRNRLFIGIIAITIVLQ--VIMVEFLKKFADT 976

  Fly   960 TPLSAEEWITVMKFSIPVVLLDETLKFVARKIADGESP 997
            ..|:..:|.|    .|.:..|...:.|..:.|...|:|
plant   977 VRLNGWQWGT----CIALASLSWPIGFFTKFIPVSETP 1010

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 276/1003 (28%)
AT3G63380NP_191897.1 P-type_ATPase_Ca_PMCA-like 133..882 CDD:319776 246/832 (30%)
Cation_ATPase_C 833..1004 CDD:376368 46/208 (22%)

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