DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SERCA and ACA4

DIOPT Version :10

Sequence 1:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster
Sequence 2:NP_181687.1 Gene:ACA4 / 818754 AraportID:AT2G41560 Length:1030 Species:Arabidopsis thaliana


Alignment Length:1037 Identity:295/1037 - (28%)
Similarity:489/1037 - (47%) Gaps:190/1037 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SKTVEQSLNFFGTDPERGLTLDQIKANQKKYGPNELPTEEGKSIWQLVLEQFDDLLVKILLLAAI 70
            :|.|..||:       .|:...::...:|.:|.|....:..:|....|.|...|:.:.||::.|:
plant   122 AKKVSVSLS-------EGIRSSEVPIREKIFGENRYTEKPARSFLMFVWEALHDITLIILMVCAV 179

  Fly    71 ISFVLALFEE------HEETFTAFVEPLVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKV 129
            :|..:.:..|      ::.|...    |.|||:::..|:....|...       .::.:.|..|:
plant   180 VSIGVGVATEGFPRGMYDGTGIL----LSILLVVMVTAISDYKQSLQ-------FRDLDREKKKI 233

  Fly   130 VRQ---DKSGIQKVRAKEIVPGDLVEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVSVIKHT 191
            :.|   |.|. |::...::|.||:|.:|:||::|||......|:  |.||:|.|:|||       
plant   234 IVQVTRDGSR-QEISIHDLVVGDVVHLSIGDQVPADGIFISGYN--LEIDESSLSGES------- 288

  Fly   192 DAIPDPRAVNQDKKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQQKLDEF 256
                :|..||::|. .|.|||.|..|.|:.:|...|:.|..||:...:.:..|.:||||.||:..
plant   289 ----EPSHVNKEKP-FLLSGTKVQNGSAKMLVTTVGMRTEWGKLMETLVDGGEDETPLQVKLNGV 348

  Fly   257 GEQLSKV-ISVICVAVWAINIGHFNDPAHGGSWIKGA-------IYYFKIAVALAVAAIPEGLPA 313
            ...:.|: :|...:....:.|....|.|..||:...:       :.||.|:|.:.|.|:|||||.
plant   349 ATIIGKIGLSFAVLTFVVLCIRFVLDKATSGSFTNWSSEDALTLLDYFAISVTIIVVAVPEGLPL 413

  Fly   314 VITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKV----EG 374
            .:|..||...:::....|:||.|.:.||:|.::.||:|||||||||.|.|::::|.|||    ||
plant   414 AVTLSLAFAMKKLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICDKVQERQEG 478

  Fly   375 NDSSFLEFEMTGSTYEPIGEVFLNG-------QRIKAADYDTLQELSTICIMCNDSAIDYNEFKQ 432
            :..|| |.|::    |.:....|.|       :.:|..|.:|                       
plant   479 SKESF-ELELS----EEVQSTLLQGIFQNTGSEVVKDKDGNT----------------------- 515

  Fly   433 AFEKVGEATETALIVLAEKLNSFSVNKSGLDRRSAAIACRGEIETKWKKEFTLE---FSRDRKSM 494
              :.:|..||.|::.....|.                   |:..|:.|:...|:   |:.|:|.|
plant   516 --QILGSPTERAILEFGLLLG-------------------GDFNTQRKEHKILKIEPFNSDKKKM 559

  Fly   495 SSYCTPLKASRLGTGPKLFVKGAPEGVLERCTHARVGTT--KVPLTSALKAKILALTGQY-GTGR 556
            |     :..:..|.|.:.|.|||.|.||:.|.:. |.:.  .||||   :.:|.:::... |...
plant   560 S-----VLIALPGGGARAFCKGASEIVLKMCENV-VDSNGESVPLT---EERITSISDIIEGFAS 615

  Fly   557 DTLRCLALAVADSPMKPDEMDLGDSTKFYQYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRV 621
            :.||.|.|...|.    ||...|:..     :...|.|.|||:.||.|..|.:::..|:||||.|
plant   616 EALRTLCLVYKDL----DEAPSGELP-----DGGYTMVAVVGIKDPVRPGVREAVQTCQAAGITV 671

  Fly   622 IVITGDNKATAEAICRRIGVFAEDEDTTGKSYSGREFDDLSPTEQKAAVARSRLFSRVEPQHKSK 686
            .::||||.:||:||.:..|::.|.    |.:..|.||.||||.|.:|.:.:.::.:|..|..|..
plant   672 RMVTGDNISTAKAIAKECGIYTEG----GLAIEGSEFRDLSPHEMRAIIPKIQVMARSLPLDKHT 732

  Fly   687 IVEFLQSMNEISAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSAAEMVLADDNFSSIVSAVEEG 750
            :|..|:.:.|:.|:||||.||||||.:|:||:||| :||.|||..|::::.||||.:||:....|
plant   733 LVSNLRKIGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFKTIVNVARWG 797

  Fly   751 RAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLD 815
            ||:|.|:::|:::.::.|:..::..|::|.:.....|..|||||||::.|.|.|.||...||:..
plant   798 RAVYINIQKFVQFQLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEG 862

  Fly   816 IMEKPP--------RKADEGLISGWLFFRYMAIGF--YVGAATVGAAAWWFVFSDEGPKLSYWQL 870
            :|::.|        .|.....|:|...::.:.:|.  :.|.:                       
plant   863 LMKRAPIARTASFITKTMWRNIAGQSVYQLIVLGILNFAGKS----------------------- 904

  Fly   871 THHLSCLGGGDEFKGVDCKIFSDPHAMTMALSVLVTIEMLNAMNSLSENQSLITMPPWCNLWLIG 935
               |..|.|.|....::..||:.          .|..::.|.:|| .|.:.:.......|.|:. 
plant   905 ---LLKLDGPDSTAVLNTVIFNS----------FVFCQVFNEINS-REIEKINVFKGMFNSWVF- 954

  Fly   936 SMALSFTLHFVILYVDVLSTVFQVTPLSAEEW---ITVMKFSIPVVLLDETLKFVARKIADG 994
            :..::.|:.|.::.|:.|.......|||.:.|   |.:...::.|.::.:.:...:|...||
plant   955 TWVMTVTVVFQVIIVEFLGAFASTVPLSWQHWLLSILIGSLNMIVAVILKCVPVESRHHHDG 1016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 292/1030 (28%)
ACA4NP_181687.1 CaATP_NAI 4..48 CDD:432606
ATPase-IIB_Ca 57..1009 CDD:273668 292/1028 (28%)
Blue background indicates that the domain is not in the aligned region.

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