DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SERCA and atp2a3

DIOPT Version :9

Sequence 1:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster
Sequence 2:NP_001072333.1 Gene:atp2a3 / 779786 XenbaseID:XB-GENE-949483 Length:1033 Species:Xenopus tropicalis


Alignment Length:994 Identity:696/994 - (70%)
Similarity:820/994 - (82%) Gaps:0/994 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDGHSKTVEQSLNFFGTDPERGLTLDQIKANQKKYGPNELPTEEGKSIWQLVLEQFDDLLVKIL 65
            |:..|:|||.:.|..|..:...||:.:|::.:::|||.||||.|||||:|:||||||:||||:||
 Frog     1 MDSAHAKTVSEVLRHFEVNENCGLSSEQVRRSREKYGLNELPAEEGKSLWELVLEQFEDLLVRIL 65

  Fly    66 LLAAIISFVLALFEEHEETFTAFVEPLVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKVV 130
            ||||.:||:||.|||.|||.||||||:||::||:.||.||||||||||||||||||||||||||:
 Frog    66 LLAAFVSFILAWFEEGEETTTAFVEPIVIIMILVINAFVGVWQERNAESAIEALKEYEPEMGKVI 130

  Fly   131 RQDKSGIQKVRAKEIVPGDLVEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVSVIKHTDAIP 195
            |.|:||:|::||::|||||:|||:||||:|||||||.|.|||||:|||||||||||||||||.||
 Frog   131 RGDRSGVQRIRARDIVPGDIVEVAVGDKVPADIRITEIRSTTLRVDQSILTGESVSVIKHTDPIP 195

  Fly   196 DPRAVNQDKKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQQKLDEFGEQL 260
            |||||||||||:||||||:|||||.|:||.||:.|.|||||.:|..||..||||||||||||:||
 Frog   196 DPRAVNQDKKNMLFSGTNIAAGKAVGIVIATGIYTEIGKIRNQMVATEPEKTPLQQKLDEFGQQL 260

  Fly   261 SKVISVICVAVWAINIGHFNDPAHGGSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRR 325
            |||||:||||||.|||||||||.|||||.:|||||||||||||||||||||||||||||||||||
 Frog   261 SKVISLICVAVWVINIGHFNDPVHGGSWFRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRR 325

  Fly   326 MAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKVEGNDSSFLEFEMTGSTYE 390
            ||||||||||||||||||||||||||||||||||||||||||:.:|:||.:.||.||.:|||||.
 Frog   326 MAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFVIEKIEGVNCSFHEFSITGSTYA 390

  Fly   391 PIGEVFLNGQRIKAADYDTLQELSTICIMCNDSAIDYNEFKQAFEKVGEATETALIVLAEKLNSF 455
            |:|:|..:.|.:....||.|.||:|||.:||||::|:||.|..:|||||||||||..|.||:|.|
 Frog   391 PVGQVLKDEQPVNCGQYDGLVELATICALCNDSSLDFNESKGVYEKVGEATETALTCLVEKMNVF 455

  Fly   456 SVNKSGLDRRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLGTGPKLFVKGAPEG 520
            :.:.|.|.:...|.||...|:...|||.||||||||||||.||..:..:...:..|:|||||||.
 Frog   456 NTDLSTLSKVERANACNSVIKKLMKKECTLEFSRDRKSMSVYCNSVAPNSGQSASKMFVKGAPES 520

  Fly   521 VLERCTHARVGTTKVPLTSALKAKILALTGQYGTGRDTLRCLALAVADSPMKPDEMDLGDSTKFY 585
            |:|||.:.|||:||:|||.:.:.||::....:|||.|||||||||..|.|.|.::|.|.|||||.
 Frog   521 VIERCNYVRVGSTKLPLTPSAREKIMSKIRDWGTGMDTLRCLALATRDVPPKLEDMQLDDSTKFI 585

  Fly   586 QYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFAEDEDTTG 650
            .||.||||||.|||||||||||..||..|:.|||:||:||||||.||.||||:||:|::.||.|.
 Frog   586 NYETNLTFVGCVGMLDPPRKEVSISIELCKRAGIKVIMITGDNKGTAVAICRKIGIFSDYEDITD 650

  Fly   651 KSYSGREFDDLSPTEQKAAVARSRLFSRVEPQHKSKIVEFLQSMNEISAMTGDGVNDAPALKKAE 715
            |:|:|||||||.|..|:.|...:|.|:||||.|||||||:|||.:||:|||||||||||||||||
 Frog   651 KAYTGREFDDLPPERQREACRSARCFARVEPAHKSKIVEYLQSYSEITAMTGDGVNDAPALKKAE 715

  Fly   716 IGIAMGSGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAA 780
            |||||||||||||||||||||||||||||||||||||||||||||||||||||:||||.|||||.
 Frog   716 IGIAMGSGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAI 780

  Fly   781 LGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKPPRKADEGLISGWLFFRYMAIGFYVG 845
            |||||||||||||||||||||||||||||||||||||||.||...|.||||||||||:|||.|||
 Frog   781 LGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKLPRNPREPLISGWLFFRYLAIGVYVG 845

  Fly   846 AATVGAAAWWFVFSDEGPKLSYWQLTHHLSCLGGGDEFKGVDCKIFSDPHAMTMALSVLVTIEML 910
            .||||||.|||::.::||:::::||.|.:.|......|.|:||.:|...:..||||||||||||.
 Frog   846 LATVGAATWWFLYDEDGPQVTFYQLRHFMKCTSDNPLFSGIDCDVFESRYPTTMALSVLVTIEMC 910

  Fly   911 NAMNSLSENQSLITMPPWCNLWLIGSMALSFTLHFVILYVDVLSTVFQVTPLSAEEWITVMKFSI 975
            ||:|||||||||:.||||.|:||:|::.:|..|||:|||:..:..||||.||:..:|:.|:|.|:
 Frog   911 NALNSLSENQSLLRMPPWLNIWLLGAIIMSMALHFLILYIKPMPLVFQVIPLNWSQWVVVLKISL 975

  Fly   976 PVVLLDETLKFVARKIADG 994
            ||:||||.||:::|...||
 Frog   976 PVILLDEGLKYISRHHLDG 994

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 692/983 (70%)
atp2a3NP_001072333.1 P-type_ATPase_SERCA 5..989 CDD:319778 692/983 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 352 1.000 Domainoid score I1001
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1462 1.000 Inparanoid score I112
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D100699at2759
OrthoFinder 1 1.000 - - FOG0000231
OrthoInspector 1 1.000 - - otm49022
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X745
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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