DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SERCA and atp1a1a.3

DIOPT Version :9

Sequence 1:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster
Sequence 2:NP_571763.1 Gene:atp1a1a.3 / 64614 ZFINID:ZDB-GENE-001212-3 Length:1024 Species:Danio rerio


Alignment Length:1075 Identity:322/1075 - (29%)
Similarity:509/1075 - (47%) Gaps:184/1075 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DGHSKTVEQSLNFFGTDPERGLTLDQIKANQKKYGPNELPTEEGKSIWQLVLEQFDDLLVKILLL 67
            |.|..|:|:....:|||..:||::.:.|....:.|||.|........|.....|.......:|.:
Zfish    43 DDHKLTLEELSRKYGTDLNKGLSITRAKEILARDGPNALTPPVTTPEWVKFCRQLFGGFQTLLWI 107

  Fly    68 AAIISF----VLALFEEHEETFTAFVEPLVILLILIANAVVGVWQERNAESAIEALKEYEPEMGK 128
            .|::.|    :.|..||.......:: .||:..::..|.....:||..:...:::.:...|:...
Zfish   108 GALLCFFAYSIQAASEEEPANDNLYL-GLVLAFVVTVNGCFSYYQEAKSSRIMDSFRNLVPQKAL 171

  Fly   129 VVRQDKSGIQKVRAKEIVPGDLVEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVSVIKHTDA 193
            |||:.:..:  :.|:::|.||||||..||:|||||||  :.|...::|.|.|||||.        
Zfish   172 VVREGEKSV--IDAEDVVVGDLVEVKGGDRIPADIRI--VSSQGCKVDNSSLTGESE-------- 224

  Fly   194 IPDPRAVNQ------DKKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQQK 252
             |..||...      :.:||.|..||...|.|||||:.||..|.:|:|.:..|..|..:||:.::
Zfish   225 -PQTRAPEMSSDNPLETRNIAFFSTNCVDGAARGVVVNTGDRTVMGRIASLASSLEGGQTPIARE 288

  Fly   253 LDEFGEQLSKVISVICVAVWAINIGHFNDPAHGGSWIKGAIYYFKIAVALAVAAIPEGLPAVITT 317
            ::.|...::.|...:.:....:::      ..|.:|::|.|:    .:.:.||.:||||||.:|.
Zfish   289 IEHFIHIITGVAVFLGLTFLVLSL------ILGYNWLEGVIF----LIGIIVANVPEGLPATVTV 343

  Fly   318 CLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKVEGNDSSFLEF 382
            ||.|..:||||||.:|::|.:|||||.|:.||||||||||.|:|:|:.|:..:.:...|::   .
Zfish   344 CLTLTAKRMAKKNCLVKNLEAVETLGSTTTICSDKTGTLTQNRMTVAHMWFDNHIHIADTT---E 405

  Fly   383 EMTGSTYEPIGEVFLNGQRIKAADYDTLQELSTICIMCNDSAIDYNE-----FKQAFEKVGEATE 442
            ..||::::          |..|    |...|:.:..:||.:....|:     .|:  :..|:|:|
Zfish   406 NQTGASFD----------RSSA----TWSALARVAGLCNRAVFQSNQSHIPVLKR--DTAGDASE 454

  Fly   443 TALIVLAEKLNSFSVNKSGLDRRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLG 507
            :||:...| |:..||               .|:...:.|...:.|:    |.:.|...:..:...
Zfish   455 SALLKCIE-LSCGSV---------------AEMRENYTKLAEIPFN----STNKYQVSIHKNPNS 499

  Fly   508 TGPK--LFVKGAPEGVLERCTHARVGTTKVPLTSALKAKILALTGQY----GTGRDTLRCLALAV 566
            :.||  |.:|||||.:||||:...:...:.|:...:|.   |....|    |.|...|......:
Zfish   500 SEPKHLLVMKGAPERILERCSTIFIQGKEQPMDDEMKD---AFQNAYLELGGLGERVLGFCHFCL 561

  Fly   567 ADSPMKPDEMDLG---DSTKFYQYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDN 628
            .|     |:...|   |:.:......||.|||::.|:||||..|.|::.:||:|||:||::|||:
Zfish   562 PD-----DQFPEGFAFDTEEMNFPTENLCFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDH 621

  Fly   629 KATAEAICRRIGVFAEDEDTTGKSYSGR---EFDDLSPTEQKAAVARSR---------------- 674
            ..||:||.:.:|:.:|..:|. ...:.|   ..|:::|.:.||.|....                
Zfish   622 PITAKAIAKGVGIISEGNETV-DDIAARLKIHIDEVNPRDAKACVIHGGELKNMTDEQLDDVLQH 685

  Fly   675 ----LFSRVEPQHKSKIVEFLQSMNEISAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSAAEMV 734
                :|:|..||.|..|||..|....|.|:|||||||:||||||:||:||| :|:.|:|.||:|:
Zfish   686 HTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMI 750

  Fly   735 LADDNFSSIVSAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVT 799
            |.||||:|||:.|||||.|::|:|:.|.|.::|.|.|:....:...:|:|..|..|.:|.::|.|
Zfish   751 LLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSKIPEMSPFLMFVLVGIPLPLGTVTILCIDLGT 815

  Fly   800 DGLPATALGFNPPDLDIMEKPPRKA------DEGLISGWLFFRYMAIGFYVGAATVGAAAWWFVF 858
            |.:||.:|.:...:.|||::.||.|      :|.|||    ..|..||.   ...||....:||.
Zfish   816 DMVPAISLAYETAESDIMKRQPRNAATDRLVNERLIS----VSYGQIGM---IQAVGGFFTYFVI 873

  Fly   859 SDEGPKLSY--------WQLTHHLSCL--GGGDEFKGVDCKIFS-DPHAMTMALSVLVTIEMLNA 912
            ..|...|.|        |: ...|:.|  ..|.::.....||.. ..|....|..|:|       
Zfish   874 LAENGFLPYDLVGIRVGWE-DRFLNDLEDSYGQQWTYESRKIVEYTCHTAFFASIVIV------- 930

  Fly   913 MNSLSENQSLITMPPWCNLWLIGSMALSF--------TLHFVIL----------YVDVLSTVFQV 959
                          .|.:|.:..:..||.        .|.|.:|          |...:....::
Zfish   931 --------------QWTDLLICKTRRLSIFQQGMKNRVLTFGLLEETALAAFLSYCPGMEVAVRM 981

  Fly   960 TPLSAEEWITVMKFSIPVVLLDETLKFVARKIADG 994
            .||....|.....:|:.:.:.||..|::.|:...|
Zfish   982 YPLKPLWWFCAFPYSLLIFIYDEVRKYILRRNPGG 1016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 319/1066 (30%)
atp1a1a.3NP_571763.1 ATPase-IIC_X-K 32..1024 CDD:273445 322/1075 (30%)
Cation_ATPase_N 41..115 CDD:214842 19/71 (27%)
E1-E2_ATPase 135..366 CDD:278548 83/253 (33%)
Cation_ATPase 428..522 CDD:289987 30/115 (26%)
COG4087 604..753 CDD:226572 59/149 (40%)
Cation_ATPase_C 800..1009 CDD:279079 55/237 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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