DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SERCA and atp1a1a.2

DIOPT Version :9

Sequence 1:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster
Sequence 2:NP_571762.1 Gene:atp1a1a.2 / 64613 ZFINID:ZDB-GENE-001212-2 Length:1023 Species:Danio rerio


Alignment Length:1062 Identity:315/1062 - (29%)
Similarity:509/1062 - (47%) Gaps:158/1062 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DGHSKTVEQSLNFFGTDPERGLTLDQIKANQKKYGPNELPTEEGKSIW----QLVLEQFDDLLVK 63
            |.|..|:::....:||...:||:..:.|...::.|||.|........|    :|:...|..|   
Zfish    42 DDHKLTLDELSRKYGTGMIKGLSSFRAKEILERDGPNALTPPPTTPQWVKFCKLLFGGFQTL--- 103

  Fly    64 ILLLAAIISFV-----LALFEE--HEETFTAFVEPLVILLILIANAVVGVWQERNAESAIEALKE 121
             |...|.:.|:     :|..|:  |:..:..    ||:..::|.|.....:||..:...:|:.:.
Zfish   104 -LWFGAFLCFLAYGIQVASVEDAAHDNLYLG----LVLAFVVIVNGWFSFYQESKSSKIMESFRN 163

  Fly   122 YEPEMGKVVRQDKSGIQKVRAKEIVPGDLVEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVS 186
            ..|:...|||..:..:  :.|:|:|.|||:||..||:||||:||  :|:...::|.|.|||||. 
Zfish   164 LVPQQALVVRDGEKKV--INAEEVVVGDLIEVCGGDRIPADLRI--VYAQGCKVDNSSLTGESE- 223

  Fly   187 VIKHTDAIPDPRAVN------QDKKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEI 245
                    |..|:..      .:.|||.|..||...|.|||:.|.||..|.:|:|.:..|..|..
Zfish   224 --------PQSRSPEFSHENPLETKNIAFFSTNCVEGTARGIAISTGDRTIMGRIASLASSLEGG 280

  Fly   246 KTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFNDPAHGGSWIKGAIYYFKIAVALAVAAIPEG 310
            :||:.::::.|...:|.|...:.|..:.:::      ..|.:||:..::    .:.:.||.:|||
Zfish   281 QTPIAREIEHFIHIISAVSIFLGVTFFVLSL------ILGYAWIEAVVF----LIGIIVANVPEG 335

  Fly   311 LPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKVEGN 375
            |||.:|.||.|..:||||||.:|::|.:|||||.|:.||||||||||.|:|:|:.|:...::...
Zfish   336 LPATVTVCLTLTAKRMAKKNCLVKNLEAVETLGSTTTICSDKTGTLTQNRMTVAHMWFDSQIHEA 400

  Fly   376 DS----SFLEFEMTGSTYEPIGEVF-LNGQRIKAADYDTLQELSTICIMCNDSAIDYNEFKQAFE 435
            |:    |...|:.:..|:..:..|. |..:.:..|:...|..|:.                   |
Zfish   401 DTTENQSGTSFDRSSPTWAALARVAGLCNRAVFRAEQSHLPVLNR-------------------E 446

  Fly   436 KVGEATETALIVLAEKLNSFSVNKSGLDRRSAAIACRG---EIETKWKKEFTLEF-SRDRKSMSS 496
            ..|:|:|:||:...|                   .|.|   |:..|::|...:.| |.::..:|.
Zfish   447 TAGDASESALLKCIE-------------------LCCGSVIEMREKYRKICEIPFNSTNKYQLSV 492

  Fly   497 YCTPLKASRLGTGPKLFVKGAPEGVLERCTHARVGTTKVPLTSALKAKI-LALTGQYGTGRDTLR 560
            :..|   |..||...|.:|||||.:|:||:...:...:.|:....|... .|.....|.|...|.
Zfish   493 HKNP---SSSGTKHLLVMKGAPERILDRCSTILINGKEQPMDDENKDSFQSAYVELGGLGERVLG 554

  Fly   561 CLALAVADSPMKP----DEMDLGDSTKFYQYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRV 621
            .....:.|.....    |..|:...|:      ||.|:|::.|:||||..|.|::.:||:|||:|
Zfish   555 FCQYNLPDDQFPEGFAFDPEDVNFPTE------NLCFLGLMSMIDPPRAAVPDAVAKCRSAGIKV 613

  Fly   622 IVITGDNKATAEAICRRIGVFAEDEDTTGKSYSGR---EFDDLSPTEQKAAVARSR--------- 674
            |::|||:..||:||.:.:|:.:|..:|. :..:.|   ...:::|.|.||.|....         
Zfish   614 IMVTGDHPITAKAIAKGVGIISEGNETV-EDIAARMNIPVGEVNPREAKACVVHGGELKNMNDSD 677

  Fly   675 -----------LFSRVEPQHKSKIVEFLQSMNEISAMTGDGVNDAPALKKAEIGIAMG-SGTAVA 727
                       :|:|..||.|..|||..|....|.|:|||||||:||||||:||:||| ||:.|:
Zfish   678 LDEILRYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVS 742

  Fly   728 KSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIPVQL 792
            |.||:|:|.||||:|||:.|||||.|::|:|:.|.|.::|.|.|:....:...:|:|..|..|.:
Zfish   743 KQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSKIPEMSPFLMFVVVGIPLPLGTVTI 807

  Fly   793 LWVNLVTDGLPATALGFNPPDLDIMEKPPRKA------DEGLISGWLFFRYMAIGFYVGAATVGA 851
            |:::|.||.:||.:..:...:.|||::.||.|      :|.|||    ..|..||..  .|..|.
Zfish   808 LFIDLGTDLIPAISYAYENAENDIMKRQPRNAQKDRLVNERLIS----MAYGQIGMI--QAVAGF 866

  Fly   852 AAWWFVFSDEGPKLSY-------WQLTHHLSCL--GGGDEFKGVDCKIFSDPHAMTMALSVLVTI 907
            ..:..|.::.|.:.||       |: ...:..|  ..|.::.....||..........:|::| :
Zfish   867 FTYITVMAENGFRPSYLPGLRVGWE-DRSIGDLEDSYGQQWTYEGRKIIESTCHTAFFISIVV-V 929

  Fly   908 EMLNAMNSLSENQSLITMPPWCNLWLIGSMALSFTLHFVILYVDVLSTVFQVTPLSAEEWITVMK 972
            :..:.:...:...|:: .....|..||.:......|...:.|...:....::.||....|.|.:.
Zfish   930 QWADLLIVKTRRNSIL-QQGMKNKVLIFAFFEEGALAAFLSYCPGMDIAVRMYPLRPLWWFTALP 993

  Fly   973 FSIPVVLLDETLKFVARKIADG 994
            :::.:...||..|::.|:...|
Zfish   994 YALIIFFYDEIRKYILRRNPGG 1015

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 312/1053 (30%)
atp1a1a.2NP_571762.1 ATPase-IIC_X-K 31..1023 CDD:273445 315/1062 (30%)
Cation_ATPase_N 40..114 CDD:214842 19/75 (25%)
E1-E2_ATPase 134..365 CDD:278548 84/253 (33%)
Cation_ATPase 427..521 CDD:289987 32/134 (24%)
COG4087 <677..752 CDD:226572 37/74 (50%)
Cation_ATPase_C 799..1008 CDD:279079 48/217 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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